RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 H7C4K7 107 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 NFIBO00712 420 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 CTXN3Q4LDR2 81 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 SLC25A24Q6NUK1 477 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 SH3BGRLO75368 114 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 SCP2P22307 547 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 PRPF18Q99633 342 aaKnown RBP14.02□□□□□ -0.16
LMBR1-201ENST00000353442 STK33Q9BYT3 514 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.16
LMBR1-201ENST00000353442 RNF112Q9ULX5 631 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 B3GAT3O94766 335 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 NCOA4Q13772 614 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 ANO5Q75V66 913 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 CYB5R4Q7L1T6 521 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 DTX3LQ8TDB6 740 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 KCTD10Q9H3F6 313 aa14.02□□□□□ -0.16
LMBR1-201ENST00000353442 HLA-DQA2P01906 255 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 CYP19A1P11511 503 aaPredicted RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 PRCPP42785 496 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 EFEMP1Q12805 493 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 NBPF9Q3BBW0 867 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 POM121L1PQ3SYA9 428 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 SKA1Q96BD8 255 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 YIPF3Q9GZM5 350 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 NUP160Q12769 1436 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 CASTOR2A6NHX0 329 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 AKIRIN2Q53H80 203 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 DDI2Q5TDH0 399 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 C9orf131Q5VYM1 1079 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 RNF44Q7L0R7 432 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 RIN2Q8WYP3 895 aaPredicted RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 HPS3Q969F9 1004 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 ZKSCAN4Q969J2 545 aaPredicted RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 THUMPD3Q9BV44 507 aaKnown RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 THG1LQ9NWX6 298 aaKnown RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 EIF3BP55884 814 aaKnown RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 SRSF11Q05519 484 aaKnown RBP14.02□□□□□ -0.17
LMBR1-201ENST00000353442 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 VPS37AQ8NEZ2 397 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 NCKAP1Q9Y2A7 1128 aa14.02□□□□□ -0.17
LMBR1-201ENST00000353442 RGS5O15539 181 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 VTNP04004 478 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 CCDC92Q53HC0 331 aaPredicted RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 LRRC8BQ6P9F7 803 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 MTHFD1LQ6UB35 978 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 GJD4Q96KN9 370 aaPredicted RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PTPRHQ9HD43 1115 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 RPRD2Q5VT52 1461 aaKnown RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PSMD3O43242 534 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 GRK2P25098 689 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 CLK2P49760 499 aaKnown RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ZNF445P59923 1031 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 NFIL3Q16649 462 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 SEPT1Q8WYJ6 367 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 TSC22D3Q99576 134 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PCSK1P29120 753 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 KYNUQ16719 465 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 KIAA1324Q6UXG2 1013 aaKnown RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PI4K2AQ9BTU6 479 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 LNPEPQ9UIQ6 1025 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 IFRD1O00458 451 aaPredicted RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 MSH4O15457 936 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 FAM200BP0CF97 657 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 NOS3P29474 1203 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 KCNK10P57789 538 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 EMC2Q15006 297 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 TMEM39BQ9GZU3 492 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 GMFGO60234 142 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ACOX1Q15067 660 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PIK3R5Q8WYR1 880 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 MRPL1Q9BYD6 325 aaKnown RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 RRP15Q9Y3B9 282 aaKnown RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 CBX4O00257 560 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 OPLAHO14841 1288 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 P3H1Q32P28 736 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 FAM20AQ96MK3 541 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 FAM96AQ9H5X1 160 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 SMPD4Q9NXE4 827 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ITGB3P05106 788 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 MYBL1P10243 752 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 CDH2P19022 906 aaPredicted RBP14.01□□□□□ -0.17
LMBR1-201ENST00000353442 RBBP4Q09028 425 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 TRAF7Q6Q0C0 670 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 PARD6BQ9BYG5 372 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ATXN3LQ9H3M9 355 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 ANAPC2Q9UJX6 822 aa14.01□□□□□ -0.17
LMBR1-201ENST00000353442 AP1G2O75843 785 aa14□□□□□ -0.17
LMBR1-201ENST00000353442 GBA2Q9HCG7 927 aaPredicted RBP14□□□□□ -0.17
LMBR1-201ENST00000353442 SERAC1Q96JX3 654 aa14□□□□□ -0.17
LMBR1-201ENST00000353442 NPHS2Q9NP85 383 aa14□□□□□ -0.17
LMBR1-201ENST00000353442 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
LMBR1-201ENST00000353442 RARS2Q5T160 578 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms