RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 OR6B3Q8NGW1 331 aa14.91□□□□□ -0.02
SEC13-202ENST00000350697 TMEM209Q96SK2 561 aa14.91□□□□□ -0.02
SEC13-202ENST00000350697 HSD3B7Q9H2F3 369 aa14.91□□□□□ -0.02
SEC13-202ENST00000350697 NDST4Q9H3R1 872 aa14.91□□□□□ -0.02
SEC13-202ENST00000350697 AFF4Q9UHB7 1163 aaKnown RBP14.91□□□□□ -0.02
SEC13-202ENST00000350697 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 TPM2P07951 284 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
SEC13-202ENST00000350697 ACAT1P24752 427 aaKnown RBP14.9□□□□□ -0.02
SEC13-202ENST00000350697 LMO2P25791 158 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 ELF1P32519 619 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 RAP1GAPP47736 663 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 CDH8P55286 799 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 IQCB1Q15051 598 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 KRT31Q15323 416 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 SLC39A12Q504Y0 691 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 INTS6LQ5JSJ4 861 aaKnown RBP14.9□□□□□ -0.02
SEC13-202ENST00000350697 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 RNF19BQ6ZMZ0 732 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 LMO3Q8TAP4 145 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 TATDN2Q93075 761 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 MSLNLQ96KJ4 702 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 NT5C1BQ96P26 610 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 SDCBP2Q9H190 292 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 FAM124BQ9H5Z6 455 aaPredicted RBP14.9□□□□□ -0.02
SEC13-202ENST00000350697 SFXN1Q9H9B4 322 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 CBX8Q9HC52 389 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 PRDM6Q9NQX0 595 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 TAB2Q9NYJ8 693 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 THEGQ9P2T0 379 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
SEC13-202ENST00000350697 A8MXQ7 604 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 H3BQ06 376 aaPredicted RBP14.89□□□□□ -0.03
SEC13-202ENST00000350697 PES1O00541 588 aaKnown RBP14.89□□□□□ -0.03
SEC13-202ENST00000350697 HCRTO43612 131 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 PDGFRBP09619 1106 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 WEE2P0C1S8 567 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 ADCY1Q08828 1119 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 LRMPQ12912 555 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 NFE2Q16621 373 aaPredicted RBP14.89□□□□□ -0.03
SEC13-202ENST00000350697 EXOC3L4Q17RC7 722 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 UVSSAQ2YD98 709 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 SYCE2Q6PIF2 218 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 LRSAM1Q6UWE0 723 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 CCDC149Q6ZUS6 474 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 LRRTM3Q86VH5 581 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 TTC39CQ8N584 583 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 PKMYT1Q99640 499 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 SYT15Q9BQS2 421 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 INTS2Q9H0H0 1204 aaKnown RBP14.89□□□□□ -0.03
SEC13-202ENST00000350697 LIMA1Q9UHB6 759 aaKnown RBP14.89□□□□□ -0.03
SEC13-202ENST00000350697 CD207Q9UJ71 328 aa14.89□□□□□ -0.03
SEC13-202ENST00000350697 MTMR11A4FU01 709 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 LRRC10BA6NIK2 292 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 PRRG1O14668 218 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 ZMYND10O75800 440 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 C8AP07357 584 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 TBXAS1P24557 533 aaPredicted RBP14.88□□□□□ -0.03
SEC13-202ENST00000350697 INCA1Q0VD86 236 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 CUL2Q13617 745 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 MAPRE1Q15691 268 aaKnown RBP14.88□□□□□ -0.03
SEC13-202ENST00000350697 LEXMQ3ZCV2 418 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 FAM171BQ6P995 826 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 UNC93AQ86WB7 457 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 SMRP1Q8NCR6 262 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 CMASQ8NFW8 434 aaPredicted RBP14.88□□□□□ -0.03
SEC13-202ENST00000350697 SLC7A14Q8TBB6 771 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 FAM200AQ8TCP9 573 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 C2orf15Q8WU43 125 aaKnown RBP14.88□□□□□ -0.03
SEC13-202ENST00000350697 TNIP3Q96KP6 325 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 PGLYRP2Q96PD5 576 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 CRACR2AQ9BSW2 395 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 VPS16Q9H269 839 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 TSPY26PQ9H489 355 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 CYP4F11Q9HBI6 524 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 HSFX1Q9UBD0 423 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 NME7Q9Y5B8 376 aa14.88□□□□□ -0.03
SEC13-202ENST00000350697 MYBPHLA2RUH7 354 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 ATP2C2O75185 946 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 SEC24AO95486 1093 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 VNN2O95498 520 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 HNRNPA1P09651 372 aaKnown RBP eCLIP14.87□□□□□ -0.03
SEC13-202ENST00000350697 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 CD58P19256 250 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 HOXA9P31269 272 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 NDST1P52848 882 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 COPB1P53618 953 aaKnown RBP14.87□□□□□ -0.03
SEC13-202ENST00000350697 PSMC1P62191 440 aaKnown RBP14.87□□□□□ -0.03
SEC13-202ENST00000350697 YWHAEP62258 255 aaKnown RBP14.87□□□□□ -0.03
SEC13-202ENST00000350697 TPM4P67936 248 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 ITIH3Q06033 890 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 AAK1Q2M2I8 961 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 PPM1LQ5SGD2 360 aa14.87□□□□□ -0.03
SEC13-202ENST00000350697 RARS2Q5T160 578 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms