RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RNPC3Q96LT9 517 aaKnown RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 PPP1R10Q96QC0 940 aaKnown RBP14.41□□□□□ -0.1
CDC42-202ENST00000344548 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.41□□□□□ -0.12e-8■■■□□ 15.4
CDC42-202ENST00000344548 RNF14Q9UBS8 474 aa14.41□□□□□ -0.1
CDC42-202ENST00000344548 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDC42-202ENST00000344548 TULP2O00295 520 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 PIK3R2O00459 728 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 SPOPO43791 374 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 MYBL1P10243 752 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 YWHAEP62258 255 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 TRAF7Q6Q0C0 670 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 VCPIP1Q96JH7 1222 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 PAAF1Q9BRP4 392 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 HMX1Q9NP08 348 aaPredicted RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 A0A1W2PQ45 241 aaPredicted RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 A0A1W2PQY0 241 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 LSM8O95777 96 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 ERBB2P04626 1255 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 GLI1P08151 1106 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 PFKMP08237 780 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 CTNNA1P35221 906 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 GPD2P43304 727 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 TAS2R40P59535 323 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 PPP1R26Q5T8A7 1209 aaPredicted RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 ERICH1Q86X53 443 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 LRRC52Q8N7C0 313 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 DDX47Q9H0S4 455 aaKnown RBP14.4□□□□□ -0.1
CDC42-202ENST00000344548 CARD9Q9H257 536 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 TRIM17Q9Y577 477 aa14.4□□□□□ -0.1
CDC42-202ENST00000344548 KPNA7A9QM74 516 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 MYO1FO00160 1098 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 PDGFRBP09619 1106 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 P4HA1P13674 534 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 PTK7Q13308 1070 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 PPP1R15BQ5SWA1 713 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 BEND6Q5SZJ8 279 aaPredicted RBP14.39□□□□□ -0.11
CDC42-202ENST00000344548 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 ANKS1BQ7Z6G8 1248 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 GLT1D1Q96MS3 346 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 MCEEQ96PE7 176 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 SELENOOQ9BVL4 669 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 NT5C1AQ9BXI3 368 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 LHX5Q9H2C1 402 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 TSPAN16Q9UKR8 245 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 L1RE1Q9UN81 338 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 PCDHA3Q9Y5H8 950 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 ESYT3A0FGR9 886 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 CCDC151A5D8V7 595 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 TMEM191CA6NGB0 347 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 M0QYV0 167 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 RAD51CO43502 376 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 GABBR2O75899 941 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 LILRA4P59901 499 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 CNGA2Q16280 664 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 ATP13A4Q4VNC1 1196 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 LIN9Q5TKA1 542 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 C3orf58Q8NDZ4 430 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 JOSD2Q8TAC2 188 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 PIWIL1Q96J94 861 aaKnown RBP14.39□□□□□ -0.11
CDC42-202ENST00000344548 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
CDC42-202ENST00000344548 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 F8VP50 259 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 GOLGA8SH3BPF8 625 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 KRIT1O00522 736 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 GPR182O15218 404 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 PROSCO94903 275 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 VDRP11473 427 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 CKBP12277 381 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 SCNN1GP51170 649 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 DSC3Q14574 896 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 TXNRD3NBQ6F5E7 133 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 TMCO3Q6UWJ1 677 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
CDC42-202ENST00000344548 TTC30AQ86WT1 665 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 RNF169Q8NCN4 708 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 ZNF518BQ9C0D4 1074 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 UNC93B1Q9H1C4 597 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 WNT8AQ9H1J5 351 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 PARVAQ9NVD7 372 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 MIF4GDA9UHW6 222 aaKnown RBP14.38□□□□□ -0.11
CDC42-202ENST00000344548 CTNNA2P26232 953 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 RFC1P35251 1148 aaPredicted RBP14.38□□□□□ -0.11
CDC42-202ENST00000344548 TUBB4BP68371 445 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 MTFR1Q15390 333 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 LONRF2Q1L5Z9 754 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 SGO2Q562F6 1265 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 C8orf74Q6P047 294 aa14.38□□□□□ -0.11
CDC42-202ENST00000344548 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms