RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CYB5R4Q7L1T6 521 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 GALNT15Q8N3T1 639 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 DHX58Q96C10 678 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 DTNBP1Q96EV8 351 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 SPAG5Q96R06 1193 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 GORASP1Q9BQQ3 440 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 ENTPD7Q9NQZ7 604 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 PAPOLBQ9NRJ5 636 aaKnown RBP7.86□□□□□ -1.15
ZNF540-202ENST00000343599 AFF4Q9UHB7 1163 aaKnown RBP7.86□□□□□ -1.15
ZNF540-202ENST00000343599 VAV3Q9UKW4 847 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 HPCAL4Q9UM19 191 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 COL4A3BPQ9Y5P4 624 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 XPOTO43592 962 aaKnown RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 NOL4O94818 638 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 FCARP24071 287 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 VSNL1P62760 191 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ILKQ13418 452 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ALCAMQ13740 583 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 SPECC1Q5M775 1068 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ZBTB41Q5SVQ8 909 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ZPBP2Q6X784 338 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CACNA2D4Q7Z3S7 1137 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 TAX1BP1Q86VP1 789 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ABI1Q8IZP0 508 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 FUKQ8N0W3 1084 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 MIPOL1Q8TD10 442 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ARPC5LQ9BPX5 153 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 SCAND2PQ9GZW5 306 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 NXF3Q9H4D5 531 aaKnown RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ACTR5Q9H9F9 607 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 PCDHA4Q9UN74 947 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 SMG5Q9UPR3 1016 aaKnown RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CXCL14O95715 111 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CCNE2O96020 404 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CFBP00751 764 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 PTPN2P17706 415 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 MAGEA11P43364 429 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 MRPS21P82921 87 aaKnown RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC85BQ15834 202 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 SLC36A4Q6YBV0 504 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 ITIH5Q86UX2 942 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 MYRFLQ96LU7 910 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 NECAB3Q96P71 396 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 TNFSF13BQ9Y275 285 aa7.85□□□□□ -1.15
ZNF540-202ENST00000343599 FRMPD2Q68DX3 1309 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-202ENST00000343599 BECN2A8MW95 431 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LINC01565O15544 149 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LINGO3P0C6S8 592 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF24P17028 368 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 TNFRSF4P43489 277 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SKOR1P84550 965 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 DLX2Q07687 328 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ENOX2Q16206 610 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SKIDA1Q1XH10 827 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 TRMT11Q7Z4G4 463 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF589Q86UQ0 364 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 APLFQ8IW19 511 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SRBD1Q8N5C6 995 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 KIFAP3Q92845 792 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 P2RY13Q9BPV8 354 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 CAPN10Q9HC96 672 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 PPP2R2CQ9Y2T4 447 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 DEXIO95424 95 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 NPTXRO95502 500 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 NTRK1P04629 796 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 RPSAP08865 295 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 GHRP10912 638 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 BDNFP23560 247 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ATXN1P54253 815 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LRRC23Q53EV4 343 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 CRELD2Q6UXH1 353 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 TMC6Q7Z403 805 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 FERMT3Q86UX7 667 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF557Q8N988 423 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 RASSF8Q8NHQ8 419 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 PPP1R10Q96QC0 940 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 BPIFA3Q9BQP9 254 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 TMUB1Q9BVT8 246 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 VN1R3Q9BXE9 311 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 IFT122Q9HBG6 1241 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ANGPTL2Q9UKU9 493 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 CITO14578 2027 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 EVPLQ92817 2033 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 GOLGA6L7A0A1B0GV03 622 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 IFIT3O14879 490 aaKnown RBP7.84□□□□□ -1.15
ZNF540-202ENST00000343599 LAMTOR5O43504 91 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 CYP21A2P08686 494 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 NAT1P18440 290 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 GNG11P61952 73 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 TMED1Q13445 227 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 ANKRD1Q15327 319 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 SFMBT2Q5VUG0 894 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
ZNF540-202ENST00000343599 KDM1BQ8NB78 822 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms