RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 INTS6LQ5JSJ4 861 aaKnown RBP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 OTOP3Q7RTS5 596 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FBXL13Q8NEE6 735 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SLC35C1Q96A29 364 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MMS19Q96T76 1030 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PKMYT1Q99640 499 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PIDD1Q9HB75 910 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CDH9Q9ULB4 789 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ASB3Q9Y575 518 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ZFP37Q9Y6Q3 630 aaPredicted RBP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 P4HA2O15460 535 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MICAL2O94851 1124 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 HLA-DRAP01903 254 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 OR4Q2P0C623 313 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PIK3CAP42336 1068 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MXI1P50539 228 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SLC39A12Q504Y0 691 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FAM171BQ6P995 826 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 LEMD2Q8NC56 503 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TAS1R2Q8TE23 839 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TMEM209Q96SK2 561 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PLXNA3P51805 1871 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 WEE2P0C1S8 567 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PTPN2P17706 415 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 GNL1P36915 607 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 DUSP4Q13115 394 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 OSTM1Q86WC4 334 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ELMOD1Q8N336 334 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ATAD1Q8NBU5 361 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CCDC150Q8NCX0 1101 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CEP295NLQ96MC4 621 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NECAB3Q96P71 396 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CYP3A43Q9HB55 503 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NXF1Q9UBU9 619 aaKnown RBP13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 YIPF1Q9Y548 306 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PCDHB5Q9Y5E4 795 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TSC2P49815 1807 aa13.99□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CCL16O15467 120 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 N4BP1O75113 896 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CCDC192P0DO97 292 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PTMSP20962 102 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ALDH1A3P47895 512 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 EPHA5P54756 1037 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 DPCR1Q3MIW9 517 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CCDC40Q4G0X9 1142 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TCERG1LQ5VWI1 586 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 C4orf50Q6ZRC1 276 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 UNC93AQ86WB7 457 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TRIM59Q8IWR1 403 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TTC39CQ8N584 583 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 RPGRIP1Q96KN7 1286 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MED15Q96RN5 788 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MRPL45Q9BRJ2 306 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 BCO2Q9BYV7 579 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CRISPLD1Q9H336 500 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CD320Q9NPF0 282 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 EPS15L1Q9UBC2 864 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 DNMT3BQ9UBC3 853 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NCOR1O75376 2440 aa13.98□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MTCL1Q9Y4B5 1905 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 DLL1O00548 723 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 HAPLN1P10915 354 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 LMO2P25791 158 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MAGEA11P43364 429 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ASPAP45381 313 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 EPHB3P54753 998 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 STX17P56962 302 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 INCA1Q0VD86 236 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TWF1Q12792 350 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CBWD6Q4V339 395 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CBWD3Q5JTY5 395 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CBWD5Q5RIA9 395 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 IQCEQ6IPM2 695 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 GRASPQ7Z6J2 395 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TDRD5Q8NAT2 981 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MYCBPAPQ8TBZ2 947 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TNIP3Q96KP6 325 aa13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ZNF512Q96ME7 567 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SYT15Q9BQS2 421 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms