RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 DDR1Q08345 913 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 AP1B1Q10567 949 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 DBN1Q16643 649 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 CEP70Q8NHQ1 597 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 TEKT4Q8WW24 435 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 NSL1Q96IY1 281 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 TLK1Q9UKI8 766 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 ENTPD3O75355 529 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 DNAJC8O75937 253 aaPredicted RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 ITGB5P18084 799 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 ADORA2BP29275 332 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 SOX11P35716 441 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 RAP1GAPP47736 663 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 MYL6P60660 151 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 ART3Q13508 389 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 CCNG2Q16589 344 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 TRIM56Q9BRZ2 755 aaKnown RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 FRMPD4Q14CM0 1322 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 DGKIO75912 1065 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 NUDT17P0C025 328 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 STAT5BP51692 787 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 AP2B1P63010 937 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 XKR3Q5GH77 459 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 FITM2Q8N6M3 262 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 CKAP2Q8WWK9 683 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 RMDN2Q96LZ7 410 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 KREMEN1Q96MU8 473 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 DONSONQ9NYP3 566 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 NCALDP61601 193 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 HEATR6Q6AI08 1181 aaKnown RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 RYBPQ8N488 228 aaPredicted RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 EXT2Q93063 718 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 MRPL4Q9BYD3 311 aaKnown RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 KLHL8Q9P2G9 620 aaPredicted RBP13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.32
SNRNP48-201ENST00000342415 A0A1W2PPM1 405 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 ATP9AO75110 1047 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 SLC4A1P02730 911 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 RXRBP28702 533 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 BTKQ06187 659 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 STX3Q13277 289 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 TRIP10Q15642 601 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 LRGUKQ96M69 825 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 PCYOX1Q9UHG3 505 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 PIK3CDO00329 1044 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 EXTL3O43909 919 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 CDH8P55286 799 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 ACTR2P61160 394 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 KCTD2Q14681 263 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 ZCCHC23Q6ZST2 131 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 ST13P4Q8IZP2 240 aaPredicted RBP13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 EIF1ADQ8N9N8 165 aaKnown RBP13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 WWP1Q9H0M0 922 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 GAKO14976 1311 aa13.02□□□□□ -0.33
SNRNP48-201ENST00000342415 LGR5O75473 907 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 PRKCBP05771 671 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 LCP1P13796 627 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 CASP2P42575 452 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 TAS2R40P59535 323 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 NME3Q13232 169 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 HIC1Q14526 733 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 PPIL6Q8IXY8 311 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 SYTL5Q8TDW5 730 aaPredicted RBP13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 TBC1D10AQ9BXI6 508 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 OSBPP22059 807 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 NUMBP49757 651 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 SEPT6Q14141 434 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 MAP3K21Q5TCX8 1036 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 POU5F2Q8N7G0 328 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 VAV3Q9UKW4 847 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 AIM2O14862 343 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 TMED1Q13445 227 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 PID1Q7Z2X4 250 aa13.01□□□□□ -0.33
SNRNP48-201ENST00000342415 TTC8Q8TAM2 541 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms