RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TAS2R40P59535 323 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 BYSLQ13895 437 aaKnown RBP15.91■□□□□ 0.14
TPM3-208ENST00000341485 SLMAPQ14BN4 828 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 PLEKHA7Q6IQ23 1121 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 PPP1R13LQ8WUF5 828 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 MAIP1Q8WWC4 291 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 RAPGEF5Q92565 580 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 PGM2Q96G03 612 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 IFT122Q9HBG6 1241 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 SPC25Q9HBM1 224 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 RNF186Q9NXI6 227 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 WHRNQ9P202 907 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 R3HDM2Q9Y2K5 976 aaKnown RBP15.91■□□□□ 0.14
TPM3-208ENST00000341485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.91■□□□□ 0.14
TPM3-208ENST00000341485 A0A087WUV0 522 aaPredicted RBP15.91■□□□□ 0.14
TPM3-208ENST00000341485 TLDC2A0PJX2 215 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 GMNCA6NCL1 334 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 GJB6O95452 261 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 HOXD10P28358 340 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 ZNF132P52740 706 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 ZNF568Q3ZCX4 644 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 MPZL3Q6UWV2 235 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 TSHZ1Q6ZSZ6 1077 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 VCPIP1Q96JH7 1222 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 TMEM109Q9BVC6 243 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 FAM49AQ9H0Q0 323 aaPredicted RBP15.91■□□□□ 0.14
TPM3-208ENST00000341485 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 ATXN2Q99700 1313 aaKnown RBP15.91■□□□□ 0.14
TPM3-208ENST00000341485 SMIM23A6NLE4 172 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 HAS3O00219 553 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 OGTO15294 1046 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 B4GALT5O43286 388 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 PSTPIP1O43586 416 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CST3P01034 146 aaPredicted RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 RARBP10826 455 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CYP2C9P11712 490 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 IVDP26440 423 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 MAP2K2P36507 400 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 MCL1Q07820 350 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 TRIM32Q13049 653 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CALCOCO2Q13137 446 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 PTK6Q13882 451 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 RHBDF2Q6PJF5 856 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 KIAA0319LQ8IZA0 1049 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 MDM1Q8TC05 714 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CD99L2Q8TCZ2 262 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CNOT10Q9H9A5 744 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 ASIC3Q9UHC3 531 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CASP8AP2Q9UKL3 1982 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 SEPT4O43236 478 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 KPNA6O60684 536 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CSDE1O75534 798 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 ASS1P00966 412 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 RALAP11233 206 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 GJA9P57773 515 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 PURAQ00577 322 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 CACNB2Q08289 660 aaPredicted RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 ADCY2Q08462 1091 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 KLF1Q13351 362 aaPredicted RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 FAM187BQ17R55 369 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 SYDE1Q6ZW31 735 aaPredicted RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 ZNF410Q86VK4 478 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 CCDC25Q86WR0 208 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 SPATS2Q86XZ4 545 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 RHOT1Q8IXI2 618 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 EPS8L3Q8TE67 593 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 HEMGNQ9BXL5 484 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 MRPL47Q9HD33 250 aaKnown RBP15.9■□□□□ 0.14
TPM3-208ENST00000341485 TNFSF13BQ9Y275 285 aa15.9■□□□□ 0.14
TPM3-208ENST00000341485 SMIM35A0A1B0GVV1 85 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 C17orf102A2RUQ5 167 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 MYADML2A6NDP7 307 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 RGS16O15492 202 aaPredicted RBP15.89■□□□□ 0.13
TPM3-208ENST00000341485 MAN1A1P33908 653 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 CHKAP35790 457 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 VEGFBP49765 207 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 IFI35P80217 286 aaPredicted RBP15.89■□□□□ 0.13
TPM3-208ENST00000341485 CAP1Q01518 475 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 TRIP13Q15645 432 aaPredicted RBP15.89■□□□□ 0.13
TPM3-208ENST00000341485 C6orf118Q5T5N4 469 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 ANKS1BQ7Z6G8 1248 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 TADA2BQ86TJ2 420 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 KATNAL2Q8IYT4 538 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 C7orf31Q8N865 590 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 ZNF606Q8WXB4 792 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 ADAM7Q9H2U9 754 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 GINS2Q9Y248 185 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 SCINQ9Y6U3 715 aa15.89■□□□□ 0.13
TPM3-208ENST00000341485 ABLIM1O14639 778 aa15.88■□□□□ 0.13
TPM3-208ENST00000341485 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
TPM3-208ENST00000341485 PGK1P00558 417 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms