RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 KRT3P12035 628 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SDC4P31431 198 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 RNF187Q5TA31 235 aaPredicted RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 EFCAB13Q8IY85 973 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 C1orf127Q8N9H9 656 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SLC35G2Q8TBE7 412 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 KRT12Q99456 494 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 SAGE1Q9NXZ1 904 aa12.42□□□□□ -0.42
C2orf88-201ENST00000340623 BARX2Q9UMQ3 279 aaPredicted RBP12.42□□□□□ -0.42
C2orf88-201ENST00000340623 ZNF211Q13398 564 aaPredicted RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 STILQ15468 1287 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 PPP6R3Q5H9R7 873 aaPredicted RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 OVOS1Q6IE37 1185 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 BAP1Q92560 729 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 TSEN34Q9BSV6 310 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 SLITRK6Q9H5Y7 841 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 GEMIN8Q9NWZ8 242 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 UMODL1Q5DID0 1318 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 ASS1P00966 412 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 NEFHP12036 1026 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 ATP1A2P50993 1020 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 TUBB2AQ13885 445 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 APTXQ7Z2E3 356 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 NOP9Q86U38 636 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 CCDC26Q8TAB7 109 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 HSPH1Q92598 858 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 TUBB2BQ9BVA1 445 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 ATAD5Q96QE3 1844 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 ANKRD65E5RJM6 399 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 DNM1LO00429 736 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 PIGRP01833 764 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 VDRP11473 427 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 CKBP12277 381 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 PBX1P40424 430 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 MDH1BQ5I0G3 518 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 CCDC117Q8IWD4 279 aaPredicted RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
C2orf88-201ENST00000340623 MCEEQ96PE7 176 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 AP1M1Q9BXS5 423 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 C11orf49Q9H6J7 331 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
C2orf88-201ENST00000340623 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 TADA3O75528 432 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 AP1G2O75843 785 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 AMHP03971 560 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 HOOK3Q86VS8 718 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 ZNF677Q86XU0 584 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 RNF10Q8N5U6 811 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 NOA1Q8NC60 698 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 PARVAQ9NVD7 372 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 GIT1Q9Y2X7 761 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 ACRP10323 421 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 FGFR1P11362 822 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 BRCC3P46736 316 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 YWHAHQ04917 246 aaPredicted RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 DYDC1Q8WWB3 177 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 KREMEN1Q96MU8 473 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 SYT15Q9BQS2 421 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 AGO3Q9H9G7 860 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 MRFAP1Q9Y605 127 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 MCM3APO60318 1980 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 MYO1CO00159 1063 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 NME3Q13232 169 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 MAP7D3Q8IWC1 876 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 USP6NLQ92738 828 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 KATNBL1Q9H079 304 aa12.4□□□□□ -0.42
C2orf88-201ENST00000340623 ZMYND8Q9ULU4 1186 aaPredicted RBP12.4□□□□□ -0.42
C2orf88-201ENST00000340623 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.435e-8■■■□□ 14.8
C2orf88-201ENST00000340623 PDGFRAP16234 1089 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 WDR59Q6PJI9 974 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 RFX6Q8HWS3 928 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 KCTD6Q8NC69 237 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 SHC3Q92529 594 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 TSPAN16Q9UKR8 245 aa12.4□□□□□ -0.43
C2orf88-201ENST00000340623 ZBTB42B2RXF5 422 aa12.39□□□□□ -0.43
C2orf88-201ENST00000340623 PRRG1O14668 218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms