RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ACTR2P61160 394 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 IRX4P78413 519 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 OGDHQ02218 1023 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 MKRN3Q13064 507 aaKnown RBP15.16■□□□□ 0.02
CPSF7-201ENST00000340437 RIPK1Q13546 671 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 CRYMQ14894 314 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 TCEAL1Q15170 157 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 ZACNQ401N2 412 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 ZNF75CPQ92670 426 aaPredicted RBP15.16■□□□□ 0.02
CPSF7-201ENST00000340437 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 MTMR12Q9C0I1 747 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 JPH1Q9HDC5 661 aaPredicted RBP15.16■□□□□ 0.02
CPSF7-201ENST00000340437 IP6K2Q9UHH9 426 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 SCINQ9Y6U3 715 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 KITP10721 976 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 KLRC2P26717 231 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 MYL6P60660 151 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 OTUD4Q01804 1114 aaKnown RBP15.16■□□□□ 0.02
CPSF7-201ENST00000340437 TRPC3Q13507 836 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 MAPK6Q16659 721 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 NAIF1Q69YI7 327 aaPredicted RBP15.16■□□□□ 0.02
CPSF7-201ENST00000340437 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 CCDC125Q86Z20 511 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 RFX6Q8HWS3 928 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 FAM71DQ8N9W8 422 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 RFWD2Q8NHY2 731 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 TCP10LQ8TDR4 215 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
CPSF7-201ENST00000340437 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 TTLL13PA6NNM8 815 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 DGAT1O75907 488 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FGFR1P11362 822 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 GCAP28676 217 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CCND2P30279 289 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 RAP1GAPP47736 663 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 EMC2Q15006 297 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 MSS51Q4VC12 460 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FAXCQ5TGI0 409 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 KATNAL2Q8IYT4 538 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 RCOR2Q8IZ40 523 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FAM13CQ8NE31 585 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FBXO36Q8NEA4 188 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 HAPLN2Q9GZV7 340 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 SLC9A2Q9UBY0 812 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 C4BPAP04003 597 aaKnown RBP15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CYP1A1P04798 512 aaPredicted RBP15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CDO1Q16878 200 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FNBP1LQ5T0N5 605 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 TCRBV7S3A2A0A539 114 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 EGFRP00533 1210 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CD48P09326 243 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 LMNB2Q03252 620 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 RNF43Q68DV7 783 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CAPRIN2Q6IMN6 1127 aaKnown RBP15.15■□□□□ 0.02
CPSF7-201ENST00000340437 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
CPSF7-201ENST00000340437 FBXO6Q9NRD1 293 aaPredicted RBP15.15■□□□□ 0.02
CPSF7-201ENST00000340437 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 STAM2O75886 525 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 RFWD3Q6PCD5 774 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 ZNF526Q8TF50 670 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 ARMCX1Q9P291 453 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 HEY2Q9UBP5 337 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 MARCOQ9UEW3 520 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 AVILO75366 819 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 GRAP2O75791 330 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 TAF5Q15542 800 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 MUM1Q2TAK8 710 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 GRAMD1AQ96CP6 724 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 PAFAH2Q99487 392 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 PSMC3IPQ9P2W1 217 aaPredicted RBP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 LGALS13Q9UHV8 139 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 FOCADQ5VW36 1801 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 MT-ND3P03897 115 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 TROVE2P10155 538 aaKnown RBP eCLIP15.14■□□□□ 0.01
CPSF7-201ENST00000340437 HMGCS2P54868 508 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 ASRGL1Q7L266 308 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 KCTD6Q8NC69 237 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 FAM111AQ96PZ2 611 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 ST6GALNAC4Q9H4F1 302 aa15.14■□□□□ 0.01
CPSF7-201ENST00000340437 WNT10BO00744 389 aa15.13■□□□□ 0.01
CPSF7-201ENST00000340437 CSDE1O75534 798 aaKnown RBP15.13■□□□□ 0.01
CPSF7-201ENST00000340437 DCTN3O75935 186 aa15.13■□□□□ 0.01
CPSF7-201ENST00000340437 GM2AP17900 193 aa15.13■□□□□ 0.01
CPSF7-201ENST00000340437 ACO1P21399 889 aaKnown RBP15.13■□□□□ 0.01
CPSF7-201ENST00000340437 GARTP22102 1010 aa15.13■□□□□ 0.01
CPSF7-201ENST00000340437 GLRA2P23416 452 aa15.13■□□□□ 0.01
CPSF7-201ENST00000340437 RFC1P35251 1148 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms