RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DESP17661 470 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 PLA2G4AP47712 749 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 BCAT1P54687 386 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 LILRA4P59901 499 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 COPS2P61201 443 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 IRX5P78411 483 aaPredicted RBP7.62□□□□□ -1.19
NUP43-201ENST00000340413 FAAP100Q0VG06 881 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 MBTPS1Q14703 1052 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 POLNQ7Z5Q5 900 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 ACTRT1Q8TDG2 376 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 SH3TC2Q8TF17 1288 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 PCDHB18PQ96TA0 734 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 SELENOOQ9BVL4 669 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 COLEC11Q9BWP8 271 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.62□□□□□ -1.197e-6■□□□□ 10.3
NUP43-201ENST00000340413 IP6K2Q9UHH9 426 aa7.62□□□□□ -1.19
NUP43-201ENST00000340413 OR6C75A6NL08 312 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 EFCAB8A8MWE9 144 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 ENPP3O14638 875 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 THAP12O43422 761 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SLU7O95391 586 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 TFRCP02786 760 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 FTLP02792 175 aaPredicted RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 GHRP10912 638 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 AIF1P55008 147 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 PIGHQ14442 188 aaPredicted RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 WDR72Q3MJ13 1102 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 ZNF569Q5MCW4 686 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 PSTKQ8IV42 348 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 SLC35F6Q8N357 371 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 ANKRD52Q8NB46 1076 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 FUBP3Q96I24 572 aaKnown RBP eCLIP7.61□□□□□ -1.19
NUP43-201ENST00000340413 TMEM106CQ9BVX2 250 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 LACRTQ9GZZ8 138 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SDCBP2Q9H190 292 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TRPV6Q9H1D0 765 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SNX25Q9H3E2 840 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 NDC80O14777 642 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 MGEA5O60502 916 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 MMEP08473 750 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 MAGEA11P43364 429 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TMEM62Q0P6H9 643 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 BST2Q10589 180 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 TMEM110Q86TL2 294 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 COLGALT2Q8IYK4 626 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 IPO4Q8TEX9 1081 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 KBTBD7Q8WVZ9 684 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 LINC01599Q8WXQ3 324 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 KAT5Q92993 513 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 C16orf45Q96MC5 204 aaPredicted RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 ELOVL4Q9GZR5 314 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TUBGCP4Q9UGJ1 667 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 AMFRQ9UKV5 643 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SAR1BQ9Y6B6 198 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SIGLEC16A6NMB1 481 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 H7C4K7 107 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 XPO1O14980 1071 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 NBNO60934 754 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 LRRN2O75325 713 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 OAZ2O95190 189 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 FAM171BQ6P995 826 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SYT10Q6XYQ8 523 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 ADGRF2Q8IZF7 708 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 THEM5Q8N1Q8 247 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TMEM199Q8N511 208 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 UBL4BQ8N7F7 174 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 PHOSPHO2Q8TCD6 241 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 SLC20A1Q8WUM9 679 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 PI4K2AQ9BTU6 479 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 HIPK3Q9H422 1215 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 CSNK1G1Q9HCP0 422 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TRMT1Q9NXH9 659 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 DDX56Q9NY93 547 aaKnown RBP7.61□□□□□ -1.19
NUP43-201ENST00000340413 SSX2IPQ9Y2D8 614 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 PCDHB7Q9Y5E2 793 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TRIP11Q15643 1979 aa7.61□□□□□ -1.19
NUP43-201ENST00000340413 TARSL2A2RTX5 802 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 CCDC188H7C350 402 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 FGFR4P22455 802 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 CTNNA1P35221 906 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 SLC8A3P57103 927 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 APBA1Q02410 837 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 IKBKEQ14164 716 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 MRPL58Q14197 206 aaKnown RBP7.6□□□□□ -1.19
NUP43-201ENST00000340413 GPNMBQ14956 572 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 SOWAHAQ2M3V2 549 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 CD101Q93033 1021 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 FAM212AQ96EL1 285 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 PKMYT1Q99640 499 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 PROSCO94903 275 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 AMHP03971 560 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 KRT19P08727 400 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 PPIGQ13427 754 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■■□□ 17.2
NUP43-201ENST00000340413 PTPN21Q16825 1174 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 MFSD5Q6N075 450 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 NT5DC3Q86UY8 548 aa7.6□□□□□ -1.19
NUP43-201ENST00000340413 RNF168Q8IYW5 571 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms