RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 CAV1Q03135 178 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 PDK4Q16654 411 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 PDIK1LQ8N165 341 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 SMC1BQ8NDV3 1235 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 ASAP3Q8TDY4 903 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TMEM109Q9BVC6 243 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 NMUR2Q9GZQ4 415 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TBX20Q9UMR3 447 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 STARD13Q9Y3M8 1113 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 UMODL1Q5DID0 1318 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 CYB561D2O14569 222 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 COPEO14579 308 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 CSDE1O75534 798 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 ZMPSTE24O75844 475 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 PSMA2P25787 234 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 ADSSP30520 456 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 MYH11P35749 1972 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 PEX6Q13608 980 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 RASA2Q15283 850 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 CDCA2Q69YH5 1023 aaPredicted RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 PIP4K2CQ8TBX8 421 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 NMD3Q96D46 503 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
ZNF648-201ENST00000339948 XPO7Q9UIA9 1087 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 SMG5Q9UPR3 1016 aaKnown RBP12.2□□□□□ -0.46
ZNF648-201ENST00000339948 TP73O15350 636 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 NCF2P19878 526 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 GLRA2P23416 452 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 GTF2H1P32780 548 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 ARL4CP56559 192 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TFAMQ00059 246 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 SWSAP1Q6NVH7 229 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 DARS2Q6PI48 645 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 PHC3Q8NDX5 983 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 C10orf82Q8WW14 230 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 BTBD10Q9BSF8 475 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 MRPL47Q9HD33 250 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 PCMTD2Q9NV79 361 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 DNALI1O14645 258 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TRPA1O75762 1119 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 HIRAP54198 1017 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 GDF10P55107 478 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 GEMIN4P57678 1058 aaKnown RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 LAMB3Q13751 1172 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 CCNG2Q16589 344 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TEX9Q8N6V9 391 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 MORC4Q8TE76 937 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 ABTB1Q969K4 478 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 ACSS2Q9NR19 701 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 NUMBLQ9Y6R0 609 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TCRBV7S3A2A0A539 114 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
ZNF648-201ENST00000339948 PSMG1O95456 288 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 ALADP13716 330 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 CCNB1P14635 433 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 USP4Q13107 963 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 CYP1B1Q16678 543 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 MSS51Q4VC12 460 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 FNBP1LQ5T0N5 605 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 RHBDF2Q6PJF5 856 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 STRCP1A6NGW2 1772 aa12.19□□□□□ -0.46
ZNF648-201ENST00000339948 TRIM49D1C9J1S8 452 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 GSC2O15499 205 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 RFX1P22670 979 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 DEUP1Q05D60 604 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 AOC3Q16853 763 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
ZNF648-201ENST00000339948 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
ZNF648-201ENST00000339948 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 ETAA1Q9NY74 926 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
ZNF648-201ENST00000339948 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms