RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 LBX1P52954 281 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 ACLYP53396 1101 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 CAPSQ13938 189 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 DERAQ9Y315 318 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 PTCH2Q9Y6C5 1203 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 OXCT1P55809 520 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 TSHZ1Q6ZSZ6 1077 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 CPLX4Q7Z7G2 160 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 ENGASEQ8NFI3 743 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 TLK1Q9UKI8 766 aa10.68□□□□□ -0.7
USP54-201ENST00000339859 ARHGAP25P42331 645 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 GUCY2DQ02846 1103 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 MAP7Q14244 749 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 SLC18A3Q16572 532 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 NOP9Q86U38 636 aaKnown RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 PDIK1LQ8N165 341 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 HEMGNQ9BXL5 484 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 ATXN3LQ9H3M9 355 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 RNPEPQ9H4A4 650 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 NID2Q14112 1375 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 GRM5P41594 1212 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 MSH2P43246 934 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 BRD3Q15059 726 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 PABPC1LQ4VXU2 614 aaKnown RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 SLC39A12Q504Y0 691 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 KRT222Q8N1A0 295 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 MAPK13O15264 365 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 GSTA1P08263 222 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 GSTA2P09210 222 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 PON1P27169 355 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 HPDP32754 393 aaPredicted RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 SLMAPQ14BN4 828 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 KRT71Q3SY84 523 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 LDLRAD1Q5T700 205 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 ACAD10Q6JQN1 1059 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 DMAP1Q9NPF5 467 aaPredicted RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 FAM105AQ9NUU6 356 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 XIRP1Q702N8 1843 aaKnown RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 CCND3P30281 292 aaPredicted RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 ARL4CP56559 192 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 CAV1Q03135 178 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 SLC24A5Q71RS6 500 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 SDCCAG8Q86SQ7 713 aaPredicted RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 TEPSINQ96N21 525 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 XPO6Q96QU8 1125 aaKnown RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
USP54-201ENST00000339859 TJP1Q07157 1748 aa10.67□□□□□ -0.7
USP54-201ENST00000339859 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 NCKAP1LP55160 1127 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 GTF2BQ00403 316 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ARHGEF7Q14155 803 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 TRIP13Q15645 432 aaPredicted RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 KLC3Q6P597 504 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 KIAA0319LQ8IZA0 1049 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 RAB42Q8N4Z0 105 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 C1orf131Q8NDD1 294 aaKnown RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 RRN3Q9NYV6 651 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 SPG21Q9NZD8 308 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 A6NNZ2 444 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 YWHAQP27348 245 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 IQCB1Q15051 598 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 TUBB8Q3ZCM7 444 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ZDHHC17Q8IUH5 632 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 CISHQ9NSE2 258 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ANO9A1A5B4 782 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 GRID2IPA4D2P6 1211 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 PEX10O60683 326 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 CASP4P49662 377 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 NDUFV1P49821 464 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 NR1I3Q14994 352 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 PPP1R13LQ8WUF5 828 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ERGIC2Q96RQ1 377 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 POP1Q99575 1024 aaKnown RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 MFSD1Q9H3U5 465 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 SNED1Q8TER0 1413 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 M0QYT0 321 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 DARSP14868 501 aaKnown RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 ETFBP38117 255 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 RAB30Q15771 203 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 UGCGQ16739 394 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 ZNF792Q3KQV3 632 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 HSDL1Q3SXM5 330 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 DDX60Q8IY21 1712 aaKnown RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 GTPBP10A4D1E9 387 aaKnown RBP10.66□□□□□ -0.7
USP54-201ENST00000339859 PFKMP08237 780 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 CXCR5P32302 372 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 TTC23LQ6PF05 361 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 GAS2L3Q86XJ1 694 aa10.66□□□□□ -0.7
USP54-201ENST00000339859 USP13Q92995 863 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms