RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CNOT1A5YKK6 2376 aaKnown RBP16.91■□□□□ 0.3
LINC01116-202ENST00000339037 TRAK2O60296 914 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
LINC01116-202ENST00000339037 CYP11A1P05108 521 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
LINC01116-202ENST00000339037 CDC25CP30307 473 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 ABCD1P33897 745 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 CNR2P34972 360 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 TUFMP49411 452 aaKnown RBP16.91■□□□□ 0.3
LINC01116-202ENST00000339037 DMWDQ09019 674 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 DSG2Q14126 1118 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 MGAT5BQ3V5L5 792 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
LINC01116-202ENST00000339037 SLC39A4Q6P5W5 647 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 LONP2Q86WA8 852 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 RASSF8Q8NHQ8 419 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 NETO1Q8TDF5 533 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 CNTNAP3BQ96NU0 1288 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 LPIN3Q9BQK8 851 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 CNTNAP3Q9BZ76 1288 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 DERAQ9Y315 318 aa16.91■□□□□ 0.3
LINC01116-202ENST00000339037 ANO9A1A5B4 782 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 K7ESF4 209 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 PIRO00625 290 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 HRO43593 1189 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 ATF6P18850 670 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 WEE1P30291 646 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 CDR1P51861 262 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 CYP4F8P98187 520 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 TNK2Q07912 1038 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 SRSF5Q13243 272 aaKnown RBP16.9■□□□□ 0.3
LINC01116-202ENST00000339037 CCINQ13939 588 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 PON2Q15165 354 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 WDR44Q5JSH3 913 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 BPIFB1Q8TDL5 484 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 ZCWPW1Q9H0M4 648 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 ASB7Q9H672 318 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 TASP1Q9H6P5 420 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
LINC01116-202ENST00000339037 SEMA4GQ9NTN9 838 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
LINC01116-202ENST00000339037 ZFHX4Q86UP3 3567 aa16.89■□□□□ 0.3
LINC01116-202ENST00000339037 MAP1BP46821 2468 aaKnown RBP16.89■□□□□ 0.29
LINC01116-202ENST00000339037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.89■□□□□ 0.29
LINC01116-202ENST00000339037 PLCG1P19174 1290 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 ACOT2P49753 483 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 GTF2BQ00403 316 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 MCM6Q14566 821 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 TAF12Q16514 161 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 TMC2Q8TDI7 906 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 FIZ1Q96SL8 496 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 PYM1Q9BRP8 204 aaKnown RBP16.89■□□□□ 0.29
LINC01116-202ENST00000339037 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 BLOC1S4Q9NUP1 217 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 C2orf42Q9NWW7 574 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
LINC01116-202ENST00000339037 TSC2P49815 1807 aa16.89■□□□□ 0.29
LINC01116-202ENST00000339037 CYB561D2O14569 222 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 SLC30A4O14863 429 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
LINC01116-202ENST00000339037 HOXA6P31267 233 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 MCM2P49736 904 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 TAF6P49848 677 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 SMARCB1Q12824 385 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
LINC01116-202ENST00000339037 CSRP2Q16527 193 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 PRR23CQ6ZRP0 262 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 CEP68Q76N32 757 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 THEM5Q8N1Q8 247 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 C2orf15Q8WU43 125 aaKnown RBP16.88■□□□□ 0.29
LINC01116-202ENST00000339037 RAD54LQ92698 747 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 SMG9Q9H0W8 520 aaKnown RBP16.88■□□□□ 0.29
LINC01116-202ENST00000339037 DPP3Q9NY33 737 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 ZMYM5Q9UJ78 669 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 NUP210Q8TEM1 1887 aaPredicted RBP16.88■□□□□ 0.29
LINC01116-202ENST00000339037 SDK1Q7Z5N4 2213 aa16.88■□□□□ 0.29
LINC01116-202ENST00000339037 TISP43B9A030 160 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 ANKRD63C9JTQ0 380 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 FOXD2O60548 495 aaPredicted RBP16.87■□□□□ 0.29
LINC01116-202ENST00000339037 BMP15O95972 392 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
LINC01116-202ENST00000339037 AVPR1AP37288 418 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 PTPAQ15257 358 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 ZC2HC1CQ53FD0 456 aaPredicted RBP16.87■□□□□ 0.29
LINC01116-202ENST00000339037 WSCD1Q658N2 575 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 CMTM8Q8IZV2 173 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 GIPC2Q8TF65 315 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 LARP4BQ92615 738 aaKnown RBP16.87■□□□□ 0.29
LINC01116-202ENST00000339037 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 CCSER1Q9C0I3 900 aa16.87■□□□□ 0.29
LINC01116-202ENST00000339037 ABI2Q9NYB9 513 aaPredicted RBP16.87■□□□□ 0.29
LINC01116-202ENST00000339037 AGO2Q9UKV8 859 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms