RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
CSMD2-202ENST00000338325 NPHP3-ACAD11A0A0J9YXS1 232 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 TM4SF5O14894 197 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 AKAP3O75969 853 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 SCP2P22307 547 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 SHC2P98077 582 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 RUNX3Q13761 415 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 TAF12Q16514 161 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 STPG1Q5TH74 334 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 FSTL4Q6MZW2 842 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 CD302Q8IX05 232 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 CMTM8Q8IZV2 173 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 C2orf15Q8WU43 125 aaKnown RBP12.44□□□□□ -0.42
CSMD2-202ENST00000338325 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
CSMD2-202ENST00000338325 PLIN2Q99541 437 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 FAM83CQ9BQN1 747 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 SLC46A2Q9BY10 475 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 HPS4Q9NQG7 708 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 GKN1Q9NS71 199 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 DSEQ9UL01 958 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 ODF2LQ9ULJ1 636 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 PCDHGA5Q9Y5G8 931 aa12.44□□□□□ -0.42
CSMD2-202ENST00000338325 SDK1Q7Z5N4 2213 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 A0A0B4J269 797 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 ANO9A1A5B4 782 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 K7ENM7 598 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 PIRO00625 290 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 NFICP08651 508 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 MPLP40238 635 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 TMEM119Q4V9L6 283 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 ARSHQ5FYA8 562 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 METTL23Q86XA0 190 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 GIPC2Q8TF65 315 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 CHFRQ96EP1 664 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 REEP2Q9BRK0 252 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 DERAQ9Y315 318 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
CSMD2-202ENST00000338325 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
CSMD2-202ENST00000338325 RNF40O75150 1001 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 HAPLN1P10915 354 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 DDX6P26196 483 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 AVPR1AP37288 418 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 CDR1P51861 262 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 CAMKK1Q8N5S9 505 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 EBF3Q9H4W6 596 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 CCL26Q9Y258 94 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 NUP205Q92621 2012 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 VWA3AA6NCI4 1184 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 OTOL1A6NHN0 477 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 CYB561D2O14569 222 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 FAM13AO94988 1023 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 EGFP01133 1207 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 DRD1P21728 446 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 TAF6P49848 677 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 NLRP12P59046 1061 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 AMPD2Q01433 879 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 BFSP1Q12934 665 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 USP13Q92995 863 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 LSM14BQ9BX40 385 aaKnown RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 SMOC1Q9H4F8 434 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 ASB7Q9H672 318 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 VPS45Q9NRW7 570 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 TDP1Q9NUW8 608 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 ABI2Q9NYB9 513 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-202ENST00000338325 C2CD2Q9Y426 696 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 ANAPC1Q9H1A4 1944 aa12.42□□□□□ -0.42
CSMD2-202ENST00000338325 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 SLC26A4O43511 780 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 KCNK5O95279 499 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 F11P03951 625 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 ARSAP15289 507 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 HMGA1P17096 107 aaKnown RBP12.41□□□□□ -0.42
CSMD2-202ENST00000338325 NMT1P30419 496 aaKnown RBP12.41□□□□□ -0.42
CSMD2-202ENST00000338325 ABCD1P33897 745 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 ZNF131P52739 623 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 KARSQ15046 597 aaKnown RBP12.41□□□□□ -0.42
CSMD2-202ENST00000338325 PLK5Q496M5 336 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms