RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SNX31Q8N9S9 440 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SUCLG2Q96I99 432 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TASP1Q9H6P5 420 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 FARP1Q9Y4F1 1045 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 USP19O94966 1318 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 STK36Q9NRP7 1315 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TTC3P53804 2025 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CYP2D7A0A087X1C5 515 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PLEKHG3A1L390 1219 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CHL1O00533 1208 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 FTLP02792 175 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 STARP49675 285 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TCP10Q12799 353 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 NR1D2Q14995 579 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 KYAT1Q16773 422 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PTPN21Q16825 1174 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SLFN13Q68D06 897 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF790Q6PG37 636 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC74BQ6ZQY2 392 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ARHGEF19Q8IW93 802 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TBCKQ8TEA7 893 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 OSCP1Q8WVF1 389 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 DDX17Q92841 729 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ISCUQ9H1K1 167 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PCIF1Q9H4Z3 704 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RMND5AQ9H871 391 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ITIH6Q6UXX5 1313 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC162PA2VCL2 907 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 USP17L12C9JPN9 530 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 USP17L21D6R901 530 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 LIFRP42702 1097 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RAB2AP61019 212 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF57Q68EA5 555 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 THEM5Q8N1Q8 247 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 VPS33AQ96AX1 596 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ARHGEF26Q96DR7 871 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 EFCAB1Q9HAE3 211 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 STAP2Q9UGK3 403 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TPRKBQ9Y3C4 175 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 M0QYV0 167 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RCVRNP35243 200 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CASP5P51878 434 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PTK6Q13882 451 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 DRAP1Q14919 205 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RDM1Q8NG50 284 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ELMO2Q96JJ3 720 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 OSBPL3Q9H4L5 887 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ADGRA2Q96PE1 1338 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 DGKIO75912 1065 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CIAO1O76071 339 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 POLBP06746 335 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PECAM1P16284 738 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 GNA15P30679 374 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 EIF2S3P41091 472 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 EIF3EP60228 445 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 HSF2Q03933 536 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TRAF3Q13114 568 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 BNIPLQ7Z465 357 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MCPH1Q8NEM0 835 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 NDUFB9Q9Y6M9 179 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 KNTC1P50748 2209 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 EFCAB10A6NFE3 127 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 E9PBE3 544 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 KCNN4O15554 427 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 GMFBP60983 142 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SCRN3Q0VDG4 424 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ABCB5Q2M3G0 1257 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 BARGINQ6ZT62 677 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ATPAF2Q8N5M1 289 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RBM46Q8TBY0 533 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 KCTD14Q9BQ13 255 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MMADHCQ9H3L0 296 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CRNNQ9UBG3 495 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 CSADQ9Y600 493 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 TM9SF1O15321 606 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 ATP6V1G2O95670 118 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 FYNP06241 537 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MSH3P20585 1137 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PTPN4P29074 926 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 C1orf54Q8WWF1 131 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 C9orf16Q9BUW7 83 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PLEKHA5Q9HAU0 1116 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 HBS1LQ9Y450 684 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 COMMD3-BMI1R4GMX3 469 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 MROH7Q68CQ1 1323 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 IFNAR1P17181 557 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 FNTAP49354 379 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 NIM1KQ8IY84 436 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 SCFD2Q8WU76 684 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 FAM167AQ96KS9 214 aa6.42□□□□□ -1.38
CSMD1-201ENST00000335551 PAIP1Q9H074 479 aaKnown RBP6.42□□□□□ -1.38
CSMD1-201ENST00000335551 RTN2O75298 545 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PGK2P07205 417 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ATP4AP20648 1035 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 GRIK1P39086 918 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CENPAP49450 140 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 RPS7P62081 194 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms