RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PHF2O75151 1096 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 ATICP31939 592 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 BTG3Q14201 252 aaPredicted RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PCSK7Q16549 785 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 ATP6V0D2Q8N8Y2 350 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PPHLN1Q8NEY8 458 aaKnown RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 DCUN1D1Q96GG9 259 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 TRIM54Q9BYV2 358 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SENP6Q9GZR1 1112 aaPredicted RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 CYP3A43Q9HB55 503 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 BLOC1S4Q9NUP1 217 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 MSCO60682 206 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SLC11A2P49281 568 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 FAM47EQ6ZV65 393 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SH3KBP1Q96B97 665 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 THOC1Q96FV9 657 aaKnown RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 TRIM51Q9BSJ1 452 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 MLXIPLQ9NP71 852 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SLIT3O75094 1523 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 BRAFP15056 766 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 MAGOHP61326 146 aaKnown RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 PTPN11Q06124 597 aaPredicted RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 HABP4Q5JVS0 413 aaKnown RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 KCNK18Q7Z418 384 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 ACSF2Q96CM8 615 aaPredicted RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 SYDE1Q6ZW31 735 aaPredicted RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 PPP1R13LQ8WUF5 828 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 KRT82Q9NSB4 513 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TFR2Q9UP52 801 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TRPV2Q9Y5S1 764 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 NFAT5O94916 1531 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 PIK3CDO00329 1044 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 ETFBP38117 255 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 CDH18Q13634 790 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 THEMIS2Q5TEJ8 643 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 OVOS1Q6IE37 1185 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 N4BP2L2Q92802 583 aaPredicted RBP15.72■□□□□ 0.11
C9orf47-201ENST00000334490 SDCCAG3Q96C92 435 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 ASB7Q9H672 318 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 INTS13Q9NVM9 706 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
C9orf47-201ENST00000334490 AP3B1O00203 1094 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 PBXIP1Q96AQ6 731 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 ITGA11Q9UKX5 1188 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 A0A0G2JND7 137 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 PSMD3O43242 534 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 LIG3P49916 1009 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 MDH1BQ5I0G3 518 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 BTNL9Q6UXG8 535 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 SUN2Q9UH99 717 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 SLC30A1Q9Y6M5 507 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 MBL2P11226 248 aaPredicted RBP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 KCNJ1P48048 391 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 MAP3K7CLP57077 242 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 SESN3P58005 492 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 ART3Q13508 389 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 NAA30Q147X3 362 aaPredicted RBP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 CCDC38Q502W7 563 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 RBM15Q96T37 977 aaKnown RBP eCLIP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
C9orf47-201ENST00000334490 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
C9orf47-201ENST00000334490 H0Y626 953 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 CFLARO15519 480 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 PSMD10O75832 226 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 EGFRP00533 1210 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 PMS1P54277 932 aaKnown RBP15.71■□□□□ 0.1
C9orf47-201ENST00000334490 NAA25Q14CX7 972 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 SHROOM1Q2M3G4 852 aaPredicted RBP15.71■□□□□ 0.1
C9orf47-201ENST00000334490 TBC1D1Q86TI0 1168 aaPredicted RBP15.71■□□□□ 0.1
C9orf47-201ENST00000334490 IL31RAQ8NI17 732 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 TRIM55Q9BYV6 548 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 SMARCAL1Q9NZC9 954 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 TRAF3IP3Q9Y228 551 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 MYOM1P52179 1685 aa15.71■□□□□ 0.1
C9orf47-201ENST00000334490 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 CABYRO75952 493 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 AXLP30530 894 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ARHGEF7Q14155 803 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 KIF19Q2TAC6 998 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 GJC2Q5T442 439 aaPredicted RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
C9orf47-201ENST00000334490 TATDN2Q93075 761 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 CYTH2Q99418 400 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 ADAM2Q99965 735 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 FKTNO75072 461 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 F9P00740 461 aa15.7■□□□□ 0.1
C9orf47-201ENST00000334490 GGCXP38435 758 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms