RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
UPK3B-202ENST00000334348 RANBP17Q9H2T7 1088 aaKnown RBP17.11■□□□□ 0.33
UPK3B-202ENST00000334348 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
UPK3B-202ENST00000334348 SLC17A7Q9P2U7 560 aa17.11■□□□□ 0.33
UPK3B-202ENST00000334348 CYP1A1P04798 512 aaPredicted RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 PYGLP06737 847 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 KRT5P13647 590 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 ANPEPP15144 967 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CHRNA5P30532 468 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 DSG1Q02413 1049 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 MCL1Q07820 350 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 SIAH1Q8IUQ4 282 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CCDC110Q8TBZ0 833 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 UBE2OQ9C0C9 1292 aaKnown RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 RAB20Q9NX57 234 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 DRG1Q9Y295 367 aaKnown RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 GOLGA8IPA6NC78 632 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 GOLGA8JA6NMD2 632 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 ETS1P14921 441 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CRABP2P29373 138 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 PHBP35232 272 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 GTF2IP78347 998 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 GTF2BQ00403 316 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 LIN52Q52LA3 116 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 LLGL2Q6P1M3 1020 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 IZUMO2Q6UXV1 221 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 NET1Q7Z628 596 aaPredicted RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CHSY1Q86X52 802 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 TMPRSS6Q8IU80 811 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 FBXL13Q8NEE6 735 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 OXNAD1Q96HP4 312 aaPredicted RBP17.1■□□□□ 0.33
UPK3B-202ENST00000334348 TUBGCP5Q96RT8 1024 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 ECSITQ9BQ95 431 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CENPKQ9BS16 269 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 TBC1D30Q9Y2I9 924 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
UPK3B-202ENST00000334348 CLUHO75153 1309 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 FCHO1O14526 889 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 CALCAP01258 141 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 IL1BP01584 269 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 DHRS4L1P0CG22 281 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 NSFP46459 744 aaKnown RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 CDK7P50613 346 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 RTP1P59025 263 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 PRKD1Q15139 912 aaPredicted RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 TAS1R2Q8TE23 839 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 HAPLN3Q96S86 360 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 MYH11P35749 1972 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 CREB3O43889 395 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 RANBP1P43487 201 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ARL4CP56559 192 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ENOSF1Q7L5Y1 443 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 MYLK4Q86YV6 388 aaPredicted RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ZNF577Q9BSK1 485 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 PHACTR1Q9C0D0 580 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 C12orf65Q9H3J6 166 aaKnown RBP17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ST6GALNAC4Q9H4F1 302 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 ZWILCHQ9H900 591 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 COMMD3-BMI1R4GMX3 469 aa17.09■□□□□ 0.33
UPK3B-202ENST00000334348 TFDP1Q14186 410 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 KLHL38Q2WGJ6 581 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 TRMT5Q32P41 509 aaKnown RBP17.08■□□□□ 0.33
UPK3B-202ENST00000334348 LIN9Q5TKA1 542 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 HAUS6Q7Z4H7 955 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 TTC7BQ86TV6 843 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 ANKMY2Q8IV38 441 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 PPP2R3CQ969Q6 453 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 PAFAH2Q99487 392 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 ALG13Q9NP73 1137 aaKnown RBP17.08■□□□□ 0.33
UPK3B-202ENST00000334348 POLLQ9UGP5 575 aa17.08■□□□□ 0.33
UPK3B-202ENST00000334348 B2RBV5 119 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 GJC1P36383 396 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 AP2B1P63010 937 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 GCNT1Q02742 428 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 LSAMPQ13449 338 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 HIF1AQ16665 826 aa17.08■□□□□ 0.32
UPK3B-202ENST00000334348 PABPC1LQ4VXU2 614 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms