RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 DNPEPQ9ULA0 475 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 FOXN2P32314 431 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 ICAM3P32942 547 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 VCPP55072 806 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 WDR4P57081 412 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 NCOA4Q13772 614 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 PIGHQ14442 188 aaPredicted RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 OASLQ15646 514 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 ZC3H12AQ5D1E8 599 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 SPOCD1Q6ZMY3 1216 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 ASAP3Q8TDY4 903 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 CDCA5Q96FF9 252 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 IMPG2Q9BZV3 1241 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 ZNF148Q9UQR1 794 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 KIAA1217Q5T5P2 1943 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 WDR90Q96KV7 1748 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
SOX2-201ENST00000325404 OATP04181 439 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 ELF1P32519 619 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 CDH5P33151 784 aaPredicted RBP20.97■□□□□ 0.95
SOX2-201ENST00000325404 SSR1P43307 286 aaKnown RBP20.97■□□□□ 0.95
SOX2-201ENST00000325404 KCNJ2P63252 427 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 TMED2Q15363 201 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 TREML2Q5T2D2 321 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 TLDC1Q6P9B6 456 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 MFSD7Q6UXD7 560 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 PLCD3Q8N3E9 789 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 ELP3Q9H9T3 547 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 PCDH9Q9HC56 1237 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 MLXIPLQ9NP71 852 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 ASS1P00966 412 aaKnown RBP20.97■□□□□ 0.95
SOX2-201ENST00000325404 KRT1P04264 644 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 CCND1P24385 295 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 RFC5P40937 340 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 SF3A3Q12874 501 aaKnown RBP eCLIP20.97■□□□□ 0.95
SOX2-201ENST00000325404 SPARCL1Q14515 664 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 PPP1R15BQ5SWA1 713 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 PCGF5Q86SE9 256 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 ANKRD13AQ8IZ07 590 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 CYP39A1Q9NYL5 469 aa20.97■□□□□ 0.95
SOX2-201ENST00000325404 FOXO6A8MYZ6 492 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 ALDH5A1P51649 535 aaPredicted RBP20.96■□□□□ 0.95
SOX2-201ENST00000325404 ARSEP51690 589 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 TFDP3Q5H9I0 405 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 SPDYAQ5MJ70 313 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 RNASEH2BQ5TBB1 312 aaKnown RBP20.96■□□□□ 0.95
SOX2-201ENST00000325404 ZPBP2Q6X784 338 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 POLNQ7Z5Q5 900 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 TXLNGQ9NUQ3 528 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 PAPPA2Q9BXP8 1791 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 OTOFQ9HC10 1997 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 hCG_1818297A0A087WSY0 165 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 ATP4AP20648 1035 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 YARSP54577 528 aaKnown RBP20.96■□□□□ 0.95
SOX2-201ENST00000325404 RPL7AP62424 266 aaKnown RBP20.96■□□□□ 0.95
SOX2-201ENST00000325404 CYP4F22Q6NT55 531 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 CENPUQ71F23 418 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 WDR49Q8IV35 697 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 BRSK2Q8IWQ3 736 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 TMEM35BQ8NCS4 154 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 FBF1Q8TES7 1133 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 OTUD5Q96G74 571 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 ZBTB45Q96K62 511 aaPredicted RBP20.96■□□□□ 0.95
SOX2-201ENST00000325404 RMDN2Q96LZ7 410 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 FAM118BQ9BPY3 351 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 ZNF302Q9NR11 478 aa20.96■□□□□ 0.95
SOX2-201ENST00000325404 WFS1O76024 890 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 UNC5CO95185 931 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 PECAM1P16284 738 aaPredicted RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 MGAT5Q09328 741 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 ZNF252P-AS1Q0IIN9 211 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 TTLL12Q14166 644 aaPredicted RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 DNAJC24Q6P3W2 148 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 GADL1Q6ZQY3 521 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 ECHDC2Q86YB7 292 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 ERO1BQ86YB8 467 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 OR5B17Q8NGF7 314 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 SLC7A3Q8WY07 619 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 TARS2Q9BW92 718 aaKnown RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 TRABDQ9H4I3 376 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 PCDHGC3Q9UN70 934 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 TELO2Q9Y4R8 837 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 IVNS1ABPQ9Y6Y0 642 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 IGKV6D-21A0A0A0MT36 114 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 IRF6O14896 467 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 EIF4BP23588 611 aaKnown RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 GPS1Q13098 491 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 E2F5Q15329 346 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 ZKSCAN8Q15776 578 aaPredicted RBP20.95■□□□□ 0.94
SOX2-201ENST00000325404 PDK4Q16654 411 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 FBXO40Q9UH90 709 aa20.95■□□□□ 0.94
SOX2-201ENST00000325404 LRRIQ4A6NIV6 560 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 KRT10P13645 584 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 CDKN2BP42772 138 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 LBX2Q6XYB7 198 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 CHST13Q8NET6 341 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 SLC35B2Q8TB61 432 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 CLMNQ96JQ2 1002 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms