RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SLC25A41Q8N5S1 370 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 NIF3L1Q9GZT8 377 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 VPS9D1Q9Y2B5 631 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 FAM205CA6NFA0 338 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 C19orf81C9J6K1 198 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 CST8O60676 142 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 COPAP53621 1224 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 HPCAP84074 193 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 GOLGA7BQ2TAP0 167 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 SLC7A14Q8TBB6 771 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 BTN2A2Q8WVV5 523 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 CNBD2Q96M20 576 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 ZFP42Q96MM3 310 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 SLC40A1Q9NP59 571 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 SLC9A1P19634 815 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
RNF40-201ENST00000324685 ATF7IP2Q5U623 682 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 ZNF512BQ96KM6 892 aaPredicted RBP21.92■■□□□ 1.1
RNF40-201ENST00000324685 ZNF609O15014 1411 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 GUCA1CO95843 209 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 TCN1P20061 433 aaPredicted RBP21.92■■□□□ 1.1
RNF40-201ENST00000324685 SERPINB3P29508 390 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 CNDP1Q96KN2 507 aa21.92■■□□□ 1.1
RNF40-201ENST00000324685 EXOSC4Q9NPD3 245 aaKnown RBP21.92■■□□□ 1.1
RNF40-201ENST00000324685 SERPINB1P30740 379 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 FXR2P51116 673 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■□□□ 13.4
RNF40-201ENST00000324685 GPAT2Q6NUI2 795 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 IPMKQ8NFU5 416 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 PDP2Q9P2J9 529 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 IGSF9BQ9UPX0 1349 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 GYPCP04921 128 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 PCSK1P29120 753 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 MOV10L1Q9BXT6 1211 aaKnown RBP21.91■■□□□ 1.1
RNF40-201ENST00000324685 CAND2O75155 1236 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 ALBP02768 609 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 IRAK1P51617 712 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 UGT3A1Q6NUS8 523 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 KIF2BQ8N4N8 673 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 HES6Q96HZ4 224 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 METTL5Q9NRN9 209 aaKnown RBP21.91■■□□□ 1.1
RNF40-201ENST00000324685 PSTPIP1O43586 416 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 SOAT2O75908 522 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 HMBSP08397 361 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 PDGFRBP09619 1106 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 PTGER2P43116 358 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 BAATQ14032 418 aaPredicted RBP21.91■■□□□ 1.1
RNF40-201ENST00000324685 DDX42Q86XP3 938 aaKnown RBP eCLIP21.91■■□□□ 1.1
RNF40-201ENST00000324685 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 STX5Q13190 355 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 CCDC142Q17RM4 750 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 IER5Q5VY09 327 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 HNRNPLLQ8WVV9 542 aaKnown RBP21.91■■□□□ 1.1
RNF40-201ENST00000324685 MAP3K14Q99558 947 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 RIT2Q99578 217 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 DAGLAQ9Y4D2 1042 aa21.91■■□□□ 1.1
RNF40-201ENST00000324685 RHOBTB1O94844 696 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 OLFML2BQ68BL8 750 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 VPS50Q96JG6 964 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 FAR2Q96K12 515 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 SRPK1Q96SB4 655 aaKnown RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 SMARCAL1Q9NZC9 954 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 UBTFL6P0CB48 400 aaPredicted RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 PRKCEQ02156 737 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 DSG1Q02413 1049 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 MAPRE1Q15691 268 aaKnown RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 CELF4Q9BZC1 486 aaKnown RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 RARBP10826 455 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 ATXN3P54252 364 aaPredicted RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 KDM7AQ6ZMT4 941 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 HECW2Q9P2P5 1572 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 NDUFB10O96000 172 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 RBP3P10745 1247 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 ITGA4P13612 1032 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 TCF3P15923 654 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 GTF2H1P32780 548 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 FAM83EQ2M2I3 478 aa21.9■■□□□ 1.1
RNF40-201ENST00000324685 TFB1MQ8WVM0 346 aaKnown RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 PRMT7Q9NVM4 692 aaPredicted RBP21.9■■□□□ 1.1
RNF40-201ENST00000324685 XPO1O14980 1071 aaKnown RBP21.89■■□□□ 1.1
RNF40-201ENST00000324685 CYTH3O43739 400 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 ANXA9O76027 345 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 USP1O94782 785 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 SOAT1P35610 550 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 C16orf86Q6ZW13 317 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 KLF6Q99612 283 aaPredicted RBP21.89■■□□□ 1.1
RNF40-201ENST00000324685 KDM6BO15054 1643 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 DGKIO75912 1065 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 POU4F1Q01851 419 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 CSTF3Q12996 717 aaKnown RBP21.89■■□□□ 1.1
RNF40-201ENST00000324685 ITIH4Q14624 930 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 LUZP2Q86TE4 346 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 DIS3LQ8TF46 1054 aaKnown RBP21.89■■□□□ 1.1
RNF40-201ENST00000324685 RIN2Q8WYP3 895 aaPredicted RBP21.89■■□□□ 1.1
RNF40-201ENST00000324685 ERGIC2Q96RQ1 377 aa21.89■■□□□ 1.1
RNF40-201ENST00000324685 MAGEA13PA6NCF6 341 aa21.89■■□□□ 1.09
RNF40-201ENST00000324685 ENTPD3O75355 529 aa21.89■■□□□ 1.09
RNF40-201ENST00000324685 HIST2H2ACQ16777 129 aaPredicted RBP21.89■■□□□ 1.09
RNF40-201ENST00000324685 HIST2H2AA3Q6FI13 130 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms