RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LRRC36Q1X8D7 754 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 RABGAP1LQ5R372 815 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 DAB2IPQ5VWQ8 1189 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 ECHDC2Q86YB7 292 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 OLFM3Q96PB7 478 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 PCDH9Q9HC56 1237 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 JPH1Q9HDC5 661 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 METTL5Q9NRN9 209 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TJP1Q07157 1748 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SPAG6O75602 509 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 APRTP07741 180 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TAC1P20366 129 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 GPC3P51654 580 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 OTUD4Q01804 1114 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 PRUNE1Q86TP1 453 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 C4orf19Q8IY42 314 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 ACTL9Q8TC94 416 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 KREMEN1Q96MU8 473 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TMEM120AQ9BXJ8 343 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 SAR1AQ9NR31 198 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
DNMT3A-202ENST00000321117 IGKV6D-41A0A0C4DH26 115 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 TM9SF1O15321 606 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 AP3M2P53677 418 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 STX3Q13277 289 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 TFDP1Q14186 410 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PDK4Q16654 411 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 MAPK6Q16659 721 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 XKR3Q5GH77 459 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PAF1Q8N7H5 531 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CEP120Q8N960 986 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 SCYL1Q96KG9 808 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 TARS2Q9BW92 718 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 ENTPD5O75356 428 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PFDN1O60925 122 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 ABHD2P08910 425 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 OSBPP22059 807 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PRKCEQ02156 737 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CUL3Q13618 768 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 BAATQ14032 418 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 VPS72Q15906 364 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 TRABD2AQ86V40 505 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CCNYQ8ND76 341 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 MBOAT7Q96N66 472 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 ZNF302Q9NR11 478 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 ADGRA3Q8IWK6 1321 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 M0QYV0 167 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 KCNN4O15554 427 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 GSTA2P09210 222 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 HOXD13P35453 343 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PEX5P50542 639 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PAPOLAP51003 745 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 MED21Q13503 144 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 EP400NLQ6ZTU2 488 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 AFAP1L2Q8N4X5 818 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 LRGUKQ96M69 825 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 SERPINI1Q99574 410 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 CORO1CQ9ULV4 474 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-202ENST00000321117 MYO5AQ9Y4I1 1855 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 CFLARO15519 480 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 GJB6O95452 261 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 HSPA4LO95757 839 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 ICAM1P05362 532 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 NR3C2P08235 984 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 LRRC6Q86X45 466 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PIP4K2CQ8TBX8 421 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 DMAC2Q9NW81 257 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PDP2Q9P2J9 529 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 R3HDM2Q9Y2K5 976 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms