RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 MLKLQ8NB16 471 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 ATAD1Q8NBU5 361 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 OR6B3Q8NGW1 331 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 SPATA18Q8TC71 538 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 SEPT5Q99719 369 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-201ENST00000320936 SMYD3Q9H7B4 428 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 WDR6Q9NNW5 1121 aaKnown RBP20.03■□□□□ 0.8
CIRBP-201ENST00000320936 SLC27A5Q9Y2P5 690 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 YIPF1Q9Y548 306 aa20.03■□□□□ 0.8
CIRBP-201ENST00000320936 TNFRSF10AO00220 468 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 HCRTO43612 131 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 FGFR1OPO95684 399 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 PDGFRBP09619 1106 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 WARSP23381 471 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 GBP2P32456 591 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 GTF2H1P32780 548 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 ALDH1A3P47895 512 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 PSMC1P62191 440 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 PLD1Q13393 1074 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 TPD52L1Q16890 204 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 MGAT5BQ3V5L5 792 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 INTS6LQ5JSJ4 861 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 KRT39Q6A163 491 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 TAS1R2Q8TE23 839 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 KBTBD7Q8WVZ9 684 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 ACSF2Q96CM8 615 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 SYT15Q9BQS2 421 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 ACBD6Q9BR61 282 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 MRPL45Q9BRJ2 306 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 PI4K2AQ9BTU6 479 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 RHOBTB2Q9BYZ6 727 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 METTL14Q9HCE5 456 aaKnown RBP20.02■□□□□ 0.8
CIRBP-201ENST00000320936 HCFC1R1Q9NWW0 138 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 DACH1Q9UI36 760 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 RWDD2AQ9UIY3 292 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 DOCK6Q96HP0 2047 aa20.02■□□□□ 0.8
CIRBP-201ENST00000320936 VNN2O95498 520 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 FSHRP23945 695 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 RAP1GAPP47736 663 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 EPHB3P54753 998 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 NLRP12P59046 1061 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 NTHL1P78549 312 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 DPCR1Q3MIW9 517 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 PABPC1LQ4VXU2 614 aaKnown RBP20.02■□□□□ 0.79
CIRBP-201ENST00000320936 IQCEQ6IPM2 695 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 SPOPLQ6IQ16 392 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 FOXR2Q6PJQ5 311 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 OTOP3Q7RTS5 596 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 FRMD5Q7Z6J6 570 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 FILIP1Q7Z7B0 1213 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 CREBRFQ8IUR6 639 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 TTC9BQ8N6N2 239 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 FAM200AQ8TCP9 573 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 TAF4BQ92750 862 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 CORO1BQ9BR76 489 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 SRRTQ9BXP5 876 aaKnown RBP20.02■□□□□ 0.79
CIRBP-201ENST00000320936 CD320Q9NPF0 282 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 PCDHB5Q9Y5E4 795 aa20.02■□□□□ 0.79
CIRBP-201ENST00000320936 C19orf67A6NJJ6 358 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 C2CD4DB7Z1M9 353 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 LOC730098B7Z3J9 87 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 GABRDO14764 452 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 SOAT2O75908 522 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 GNA14O95837 355 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 ASS1P00966 412 aaKnown RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 POU2F2P09086 479 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 GNL1P36915 607 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 NOP14P78316 857 aaKnown RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 SMARCB1Q12824 385 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 NFE2Q16621 373 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 LRRTM3Q86VH5 581 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 SPPL2BQ8TCT7 592 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 C2orf15Q8WU43 125 aaKnown RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 ZNF512Q96ME7 567 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-201ENST00000320936 CRISPLD1Q9H336 500 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 VRTNQ9H8Y1 702 aa20.01■□□□□ 0.79
CIRBP-201ENST00000320936 A8MXQ7 604 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 TACC1O75410 805 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 LMO2P25791 158 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 CDH8P55286 799 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 CCDC183Q5T5S1 534 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 LIMS2Q7Z4I7 341 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 SPATA2LQ8IUW3 424 aaPredicted RBP20■□□□□ 0.79
CIRBP-201ENST00000320936 FBXL13Q8NEE6 735 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 TMLHEQ9NVH6 421 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 GTF3C4Q9UKN8 822 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 CDH9Q9ULB4 789 aa20■□□□□ 0.79
CIRBP-201ENST00000320936 ATP2C2O75185 946 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 PAPLNO95428 1278 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 RHOP08100 348 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 CCDC192P0DO97 292 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 PTPN2P17706 415 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 TUFMP49411 452 aaKnown RBP19.99■□□□□ 0.79
CIRBP-201ENST00000320936 VEPH1Q14D04 833 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 TAF12Q16514 161 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 CCDC142Q17RM4 750 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 C4orf50Q6ZRC1 276 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 RNF135Q8IUD6 432 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 SLC35C1Q96A29 364 aa19.99■□□□□ 0.79
CIRBP-201ENST00000320936 NIF3L1Q9GZT8 377 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms