RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 RAD9BQ6WBX8 426 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 ARMCX1Q9P291 453 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 TNFAIP8O95379 198 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 HMGB2P26583 209 aaKnown RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 C11orf96Q7Z7L8 435 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 PYDC1Q8WXC3 89 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 BAIAP3O94812 1187 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 EIF2AK2P19525 551 aaKnown RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 SERPINB8P50452 374 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 TAF8Q7Z7C8 310 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 PPP2R3BQ9Y5P8 575 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 CCDC130P13994 396 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 PEX5P50542 639 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 CCNIQ14094 377 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 RABL6Q3YEC7 729 aaPredicted RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 BTN2A1Q7KYR7 527 aa9.1□□□□□ -0.95
USF3-201ENST00000316407 CCNL1Q9UK58 526 aaPredicted RBP9.1□□□□□ -0.95
USF3-201ENST00000316407 CLRN2A0PK11 232 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 GOLGA8TH3BQL2 631 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 KCNK10P57789 538 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 SRP54P61011 504 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 DLGAP5Q15398 846 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 SCN4BQ8IWT1 228 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 RDM1Q8NG50 284 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 CASP5P51878 434 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 HSPA2P54652 639 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 KCNQ4P56696 695 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ARMCX2Q7L311 632 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 RNF148Q8N7C7 305 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ZNF483Q8TF39 744 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 SEMA4DQ92854 862 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 FAM129AQ9BZQ8 928 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 PCDH12Q9NPG4 1184 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 IQCMA0A1B0GVH7 501 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 IFNAR1P17181 557 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 CALB2P22676 271 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 QARSP47897 775 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 NECTIN1Q15223 517 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 RGS21Q2M5E4 152 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 FAM43BQ6ZT52 329 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 ZNF624Q9P2J8 865 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 PKP3Q9Y446 797 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ZBTB49Q6ZSB9 765 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 TMEM35BQ8NCS4 154 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 EPB41L4AQ9HCS5 686 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 CLIC5Q9NZA1 410 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 GSTM1P09488 218 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 MYLK2Q9H1R3 596 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 A0A1B0GTH6 734 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 IDH3BO43837 385 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 SLC18A3Q16572 532 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 POU5F2Q8N7G0 328 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 VTA1Q9NP79 307 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 RABGEF1Q9UJ41 708 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ITGA3P26006 1051 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 ZNF618Q5T7W0 954 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 BNC2Q6ZN30 1099 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 E2F7Q96AV8 911 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 STX7O15400 261 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 TRIM32Q13049 653 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 IZUMO1Q8IYV9 350 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 HPS1Q92902 700 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 LATS2Q9NRM7 1088 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 B3GNT6Q6ZMB0 384 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 STON1Q9Y6Q2 735 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 RALBP11234 206 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 CYB5R4Q7L1T6 521 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 DENND6AQ8IWF6 608 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 UNKQ9C0B0 810 aaKnown RBP9.09□□□□□ -0.95
USF3-201ENST00000316407 PTPRHQ9HD43 1115 aa9.09□□□□□ -0.95
USF3-201ENST00000316407 PHGDHO43175 533 aaKnown RBP9.09□□□□□ -0.96
USF3-201ENST00000316407 GTF2H3Q13889 308 aa9.09□□□□□ -0.96
USF3-201ENST00000316407 RNF219Q5W0B1 726 aaPredicted RBP9.09□□□□□ -0.96
USF3-201ENST00000316407 CYP2R1Q6VVX0 501 aa9.09□□□□□ -0.96
USF3-201ENST00000316407 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.96
USF3-201ENST00000316407 MLH3Q9UHC1 1453 aa9.09□□□□□ -0.96
USF3-201ENST00000316407 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 PPIP5K2O43314 1243 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 ABATP80404 500 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 TFDP2Q14188 446 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 TYW3Q6IPR3 259 aaKnown RBP9.08□□□□□ -0.96
USF3-201ENST00000316407 TMEM260Q9NX78 707 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 ARHGEF26Q96DR7 871 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 ERP44Q9BS26 406 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 SSNA1O43805 119 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 PGM3O95394 542 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 PGK2P07205 417 aa9.08□□□□□ -0.96
USF3-201ENST00000316407 CCNHP51946 323 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms