RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RALGAPA2Q2PPJ7 1873 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 TCF4P15884 667 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 NDST1P52848 882 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 PURAQ00577 322 aaKnown RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 ZBTB6Q15916 424 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 KATNAL2Q8IYT4 538 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 C1orf54Q8WWF1 131 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 HEXIM2Q96MH2 286 aaKnown RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 RNF19AQ9NV58 838 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 RASAL2Q9UJF2 1139 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 BARX2Q9UMQ3 279 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 DERAQ9Y315 318 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 PASKQ96RG2 1323 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 C17orf102A2RUQ5 167 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 F8VP50 259 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 PPEF2O14830 753 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 MICAL2O94851 1124 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 GJC1P36383 396 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 YARSP54577 528 aaKnown RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 DRG2P55039 364 aaKnown RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 DMTNQ08495 405 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 INCA1Q0VD86 236 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 SGO2Q562F6 1265 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 CCDC50Q8IVM0 306 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 CPXM1Q96SM3 734 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 RUFY1Q96T51 708 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 KATNAL1Q9BW62 490 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 TRIM6Q9C030 488 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-201ENST00000315286 FAM204AQ9H8W3 233 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
CCDC43-201ENST00000315286 MYADML2A6NDP7 307 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 PODXLO00592 558 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 OPA1O60313 960 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 RALAP11233 206 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 AKR1A1P14550 325 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 AKAP5P24588 427 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 FNTAP49354 379 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 TAP1Q03518 808 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 SREBF2Q12772 1141 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 GLRA4Q5JXX5 417 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 ALKAL1Q6UXT8 129 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 C18orf25Q96B23 403 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-201ENST00000315286 APOL6Q9BWW8 343 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 HEMGNQ9BXL5 484 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 ZDHHC18Q9NUE0 388 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 TUBGCP4Q9UGJ1 667 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.43■□□□□ 0.7
CCDC43-201ENST00000315286 PIN4Q9Y237 131 aaKnown RBP19.43■□□□□ 0.7
CCDC43-201ENST00000315286 PTPN22Q9Y2R2 807 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 TLL2Q9Y6L7 1015 aa19.43■□□□□ 0.7
CCDC43-201ENST00000315286 GOLGA8SH3BPF8 625 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 RECQL4O94761 1208 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 VDRP11473 427 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 AXLP30530 894 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 HSD17B3P37058 310 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 MYO1EQ12965 1108 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 SNX1Q13596 522 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 UAP1Q16222 522 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 CNGA2Q16280 664 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 DPH6Q7L8W6 267 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 ANKS1BQ7Z6G8 1248 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 C7orf31Q8N865 590 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 EXD1Q8NHP7 514 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 EXOC4Q96A65 974 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 LRRC45Q96CN5 670 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 RUNDC3BQ96NL0 473 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 CHST7Q9NS84 486 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 KRT14P02533 472 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 C6orf222P0C671 652 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 RFC1P35251 1148 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 RPL21P46778 160 aaKnown RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 PSMC1P62191 440 aaKnown RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 GOLGA6L1Q8N7Z2 621 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 MAIP1Q8WWC4 291 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 ATG4AQ8WYN0 398 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 ARHGAP39Q9C0H5 1083 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 KLHL11Q9NVR0 708 aa19.42■□□□□ 0.7
CCDC43-201ENST00000315286 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-201ENST00000315286 SIGLEC16A6NMB1 481 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 M0QYV0 167 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 DUSP11O75319 330 aaKnown RBP19.41■□□□□ 0.7
CCDC43-201ENST00000315286 ERBB2P04626 1255 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 KRT3P12035 628 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 HOXC8P31273 242 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 GPD2P43304 727 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 PLTPP55058 493 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 KLF1Q13351 362 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-201ENST00000315286 PIGHQ14442 188 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-201ENST00000315286 ZDHHC24Q6UX98 284 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 JOSD2Q8TAC2 188 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 UBA3Q8TBC4 463 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 RNF25Q96BH1 459 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-201ENST00000315286 ARL8AQ96BM9 186 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 FMO2Q99518 471 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 OSBPL8Q9BZF1 889 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 GRHL1Q9NZI5 618 aa19.41■□□□□ 0.7
CCDC43-201ENST00000315286 CNTN3Q9P232 1028 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms