RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PTPRN2Q92932 1015 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SERPINB12Q96P63 405 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PANX3Q96QZ0 392 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM60Q9H2L4 133 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FANCFQ9NPI8 374 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 LATS2Q9NRM7 1088 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF500O60304 480 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ITIH2P19823 946 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TYK2P29597 1187 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 HMOX2P30519 316 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PPP3CCP48454 512 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 INSCQ1MX18 579 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PROSER3Q2NL68 480 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MGAT5BQ3V5L5 792 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ZCCHC8Q6NZY4 707 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 USP17L6PQ6QN14 398 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 STRADAQ7RTN6 431 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CMTR1Q8N1G2 835 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PAGE5Q96GU1 130 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GPR63Q9BZJ6 419 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SYTL2Q9HCH5 934 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TRPC7Q9HCX4 862 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ABHD10Q9NUJ1 306 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PSME2Q9UL46 239 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 EVPLQ92817 2033 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SLCO1B7G3V0H7 640 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ASGR1P07306 291 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GZMAP12544 262 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MAPK1P28482 360 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ABL2P42684 1182 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CDH6P55285 790 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 RPS6P62753 249 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SP3Q02447 781 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SNX30Q5VWJ9 437 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 C4orf19Q8IY42 314 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 EXD1Q8NHP7 514 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 BCAS4Q8TDM0 211 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 HES6Q96HZ4 224 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GAS2L1Q99501 681 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SLC39A8Q9C0K1 460 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MFSD1Q9H3U5 465 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MAN1B1Q9UKM7 699 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FNDC3AQ9Y2H6 1198 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 COPG1Q9Y678 874 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 NINQ8N4C6 2090 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 DISP2A7MBM2 1401 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 KNL1Q8NG31 2342 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 VIRMAQ69YN4 1812 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 ERI2A8K979 691 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 BUB1O43683 1085 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FKTNO75072 461 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 HALP42357 657 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 HERVK_113P62684 666 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 COASYQ13057 564 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 FASTKD1Q53R41 847 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TFDP3Q5H9I0 405 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PKN3Q6P5Z2 889 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TRMT10CQ7L0Y3 403 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 EPM2AIP1Q7L775 607 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PIK3R5Q8WYR1 880 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 LENG9Q96B70 501 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SPDL1Q96EA4 605 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SERPINB11Q96P15 392 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TRIM9Q9C026 710 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PHACTR1Q9C0D0 580 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PCIF1Q9H4Z3 704 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GID8Q9NWU2 228 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CRYL1Q9Y2S2 319 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 CLIC4Q9Y696 253 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 COL1A2P08123 1366 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 RASA4BC9J798 803 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 RASA4O43374 803 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 KATNA1O75449 491 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SOAT2O75908 522 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MPOP05164 745 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PYGMP11217 842 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 RPL3P39023 403 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SULT2A1Q06520 285 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TRIP4Q15650 581 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PPP1R15BQ5SWA1 713 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 VSTM4Q8IW00 320 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SGSM3Q96HU1 749 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TACO1Q9BSH4 297 aaKnown RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 C2orf49Q9BVC5 232 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 KCNH7Q9NS40 1196 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM39AQ9NV64 488 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 NDFIP2Q9NV92 336 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GRID1Q9ULK0 1009 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 SNX9Q9Y5X1 595 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 NCAM1P13591 858 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 GYS1P13807 737 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 KELP23276 732 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 AKT1P31749 480 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 KRT20P35900 424 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 EFTUD2Q15029 972 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLOCK-201ENST00000309964 UBE2SQ16763 222 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 AAK1Q2M2I8 961 aa3.33□□□□□ -1.88
CLOCK-201ENST00000309964 PID1Q7Z2X4 250 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms