RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 CNTN3Q9P232 1028 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 PCDHA3Q9Y5H8 950 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 SMIM28A0A1B0GU29 152 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 TLR3O15455 904 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 ECHS1P30084 290 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 MYO1EQ12965 1108 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 HLTFQ14527 1009 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 SMG8Q8ND04 991 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 EXOC4Q96A65 974 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 HEXIM2Q96MH2 286 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 NAP1L3Q99457 506 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 FAM204AQ9H8W3 233 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 CYP3A43Q9HB55 503 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 GOLGA2P5Q9HBQ8 144 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 SCN1AP35498 2009 aa23.81■■□□□ 1.4
PDLIM2-202ENST00000308354 M0QZ92 97 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 PAEPP09466 180 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 ERICH1Q86X53 443 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 BEST2Q8NFU1 509 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 CCDC26Q8TAB7 109 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 OSBPL7Q9BZF2 842 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 MRPL47Q9HD33 250 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 PARVAQ9NVD7 372 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 DERAQ9Y315 318 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 GRIN2DO15399 1336 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 CCDC66A2RUB6 948 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 BHMG1C9JSJ3 638 aaPredicted RBP23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 O00370 1275 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 CHRNA1P02708 482 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 MAATS1Q7Z4T9 603 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 BARX2Q9UMQ3 279 aaPredicted RBP23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 USTQ9Y2C2 406 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 CEP83Q9Y592 693 aa23.8■■□□□ 1.4
PDLIM2-202ENST00000308354 CUL1Q13616 776 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 FAXDC2Q96IV6 333 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 MRPL45Q9BRJ2 306 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 SCINQ9Y6U3 715 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 GOLGA6L10A0A0M3HER8 536 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 MEIS3P2A8K0S8 358 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 MED7O43513 233 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 CTNNA2P26232 953 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 CDH5P33151 784 aaPredicted RBP23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 PTPN20Q4JDL3 420 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 C9orf57Q5W0N0 161 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 SERINC5Q86VE9 423 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 C12orf29Q8N999 325 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 FEZF2Q8TBJ5 459 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 ZNF518BQ9C0D4 1074 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 SRRDQ9UH36 339 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 ST3GAL5Q9UNP4 418 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 TRPV2Q9Y5S1 764 aa23.79■■□□□ 1.4
PDLIM2-202ENST00000308354 TCRBV7S2A1N4TA0A589 114 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 ERICH4A6NGS2 130 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 HSF2BPO75031 334 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 RPS6KA5O75582 802 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 PROSCO94903 275 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 STAU1O95793 577 aaKnown RBP23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 CALB1P05937 261 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 RWDD2BP57060 319 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 SOX4Q06945 474 aaPredicted RBP23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 ZDHHC14Q8IZN3 488 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 KLHDC9Q8NEP7 349 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 MCEEQ96PE7 176 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 DAPK3O43293 454 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 MICAL2O94851 1124 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 LMAN1P49257 510 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 INCA1Q0VD86 236 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 SEL1L2Q5TEA6 688 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 ALS2CLQ60I27 953 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 RSPH3Q86UC2 560 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 UBA3Q8TBC4 463 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 ZFP42Q96MM3 310 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 ZIM3Q96PE6 472 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 TRIM51Q9BSJ1 452 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 NEUROG2Q9H2A3 272 aa23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 UBQLN1Q9UMX0 589 aaKnown RBP23.78■■□□□ 1.4
PDLIM2-202ENST00000308354 M0QYV0 167 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 THPOP40225 353 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 SSR1P43307 286 aaKnown RBP23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 CCSAPQ6IQ19 270 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 PPP1R2P3Q6NXS1 205 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 DNAJC24Q6P3W2 148 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 MREGQ8N565 214 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 EIF1ADQ8N9N8 165 aaKnown RBP23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 CPXM1Q96SM3 734 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 CREBZFQ9NS37 354 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 NME7Q9Y5B8 376 aa23.77■■□□□ 1.4
PDLIM2-202ENST00000308354 GOLGA8SH3BPF8 625 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 HCRTO43612 131 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 GJC1P36383 396 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 TAS2R40P59535 323 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 NKX3-2P78367 333 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 CLUL1Q15846 466 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 PTGISQ16647 500 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 SH3GL2Q99962 352 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 SENP6Q9GZR1 1112 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 LHX5Q9H2C1 402 aa23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.76■■□□□ 1.39
PDLIM2-202ENST00000308354 TCRBV5S1A1TA0A578 114 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms