RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 GRIP2Q9C0E4 1043 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 KLHL4Q9C0H6 718 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TTC7AQ9ULT0 858 aaPredicted RBP15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TJP3O95049 919 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 ZNF618Q5T7W0 954 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 SLFN12LQ6IEE8 588 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 POTEGQ6S5H5 508 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 BORCS5Q969J3 196 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 AGBL1Q96MI9 1066 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 DDTLA6NHG4 134 aaPredicted RBP15.97■□□□□ 0.15
LEMD3-201ENST00000308330 TNFAIP8O95379 198 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 LINGO3P0C6S8 592 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 CCDC130P13994 396 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 CCNE1P24864 410 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 NSFP46459 744 aaKnown RBP15.97■□□□□ 0.15
LEMD3-201ENST00000308330 MFAP3P55082 362 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 OXCT1P55809 520 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 PPP2R5CQ13362 524 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 NSL1Q96IY1 281 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 JPH1Q9HDC5 661 aaPredicted RBP15.97■□□□□ 0.15
LEMD3-201ENST00000308330 POLE3Q9NRF9 147 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 KLHL20Q9Y2M5 609 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 ARHGEF37A1IGU5 675 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 WNT10BO00744 389 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 LRRN2O75325 713 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 EPN2O95208 641 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 CIITAP33076 1130 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 PRAMEP78395 509 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 NR1H3Q13133 447 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 RAD9BQ6WBX8 426 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 LXNQ9BS40 222 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 TOPORSQ9NS56 1045 aaPredicted RBP15.97■□□□□ 0.15
LEMD3-201ENST00000308330 TUBGCP4Q9UGJ1 667 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 AK5Q9Y6K8 562 aa15.97■□□□□ 0.15
LEMD3-201ENST00000308330 EXOC1LA0A1B0GW35 172 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 IL1R1P14778 569 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 PPP2R5DQ14738 602 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 WDR45BQ5MNZ6 344 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 CENPUQ71F23 418 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 GPC2Q8N158 579 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 ATP8B4Q8TF62 1192 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 STK33Q9BYT3 514 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 ARHGAP26Q9UNA1 814 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 TRIM64A6NGJ6 449 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 TRIM64BA6NI03 449 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 B2RBV5 119 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 STMND1H3BQB6 276 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 SEC24DO94855 1032 aaPredicted RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 H2AFZP0C0S5 128 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 PTPN4P29074 926 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 IL12RB1P42701 662 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 H2AFVQ71UI9 128 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 SH2D3AQ9BRG2 576 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 CHID1Q9BWS9 393 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 UPF3AQ9H1J1 476 aaKnown RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 SNX24Q9Y343 169 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 CAMTA1Q9Y6Y1 1673 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 AFPP02771 609 aaKnown RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 LACTB2Q53H82 288 aaPredicted RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 FSCBQ5H9T9 825 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 CYP4F22Q6NT55 531 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
LEMD3-201ENST00000308330 NSMCE3Q96MG7 304 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.15
LEMD3-201ENST00000308330 WFS1O76024 890 aa15.96■□□□□ 0.14
LEMD3-201ENST00000308330 PGM3O95394 542 aa15.96■□□□□ 0.14
LEMD3-201ENST00000308330 MAGEA10P43363 369 aaPredicted RBP15.96■□□□□ 0.14
LEMD3-201ENST00000308330 OTUD4Q01804 1114 aaKnown RBP15.96■□□□□ 0.14
LEMD3-201ENST00000308330 TKFCQ3LXA3 575 aa15.96■□□□□ 0.14
LEMD3-201ENST00000308330 HDDC2Q7Z4H3 204 aa15.96■□□□□ 0.14
LEMD3-201ENST00000308330 KCNQ5Q9NR82 932 aa15.96■□□□□ 0.14
LEMD3-201ENST00000308330 RNF103-CHMP3A0A140T963 221 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 RTN2O75298 545 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 CD58P19256 250 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 YWHAGP61981 247 aaKnown RBP eCLIP15.95■□□□□ 0.14
LEMD3-201ENST00000308330 ALCAMQ13740 583 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 SGSM1Q2NKQ1 1148 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 SPIRE2Q8WWL2 714 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 PTPRN2Q92932 1015 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 CAVIN3Q969G5 261 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 PCDH12Q9NPG4 1184 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 ETNK2Q9NVF9 386 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 TBCCD1Q9NVR7 557 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 SLC16A4O15374 487 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 HSD17B3P37058 310 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 CASP7P55210 303 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 SPATA16Q9BXB7 569 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 RTFDC1Q9BY42 306 aaPredicted RBP15.95■□□□□ 0.14
LEMD3-201ENST00000308330 CYP4F11Q9HBI6 524 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 PTTG2Q9NZH5 202 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 PP2D1A8MPX8 630 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 EIF4A3P38919 411 aaKnown RBP15.95■□□□□ 0.14
LEMD3-201ENST00000308330 BACE1P56817 501 aa15.95■□□□□ 0.14
LEMD3-201ENST00000308330 RHBDL3P58872 404 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms