RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 F5H6K3 240 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 PDLIM1O00151 329 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 FAM13AO94988 1023 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 GAS8O95995 478 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ASNSP08243 561 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 DDX5P17844 614 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ECE1P42892 770 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 KLRC3Q07444 240 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 DRAP1Q14919 205 aaPredicted RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SYDE2Q5VT97 1194 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 LENG9Q96B70 501 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 CENPTQ96BT3 561 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 DGCR14Q96DF8 476 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 OMA1Q96E52 524 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SSX2IPQ9Y2D8 614 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ALADP13716 330 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 PTPN4P29074 926 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 TREML1Q86YW5 311 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SCFD2Q8WU76 684 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 GRAMD1AQ96CP6 724 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 THAP2Q9H0W7 228 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 PABPC3Q9H361 631 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 DNAJC12Q9UKB3 198 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 TGFB1I1O43294 461 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 KDSRQ06136 332 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 EDRF1Q3B7T1 1238 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 DCAF12L1Q5VU92 463 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 EPM2AIP1Q7L775 607 aaPredicted RBP10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SIAH1Q8IUQ4 282 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 SEMA4AQ9H3S1 761 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 TMEM59LQ9UK28 342 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 TELO2Q9Y4R8 837 aa10.98□□□□□ -0.65
MSRB3-201ENST00000308259 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SBF2Q86WG5 1849 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SMIM31A0A1B0GVY4 71 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 AP3B1O00203 1094 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 STRNO43815 780 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PAEPP09466 180 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 CNGA2Q16280 664 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 GSTA3Q16772 222 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 HYIQ5T013 277 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 KAZNQ674X7 775 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 FRMD5Q7Z6J6 570 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 NT5DC3Q86UY8 548 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SLC20A1Q8WUM9 679 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SRPK1Q96SB4 655 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 KLHL4Q9C0H6 718 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 WASF2Q9Y6W5 498 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 CBFA2T3O75081 653 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 ENTPD3O75355 529 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 ZWINTO95229 277 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 HARSP12081 509 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 MARSP56192 900 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 ESRRGP62508 458 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 CCNA1P78396 465 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 TAF12Q16514 161 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 C9orf131Q5VYM1 1079 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 RFWD3Q6PCD5 774 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SLFN12Q8IYM2 578 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SCAIQ8N9R8 606 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 ZSWIM2Q8NEG5 633 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 FERMT1Q9BQL6 677 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 ALG13Q9NP73 1137 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PARP2Q9UGN5 583 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 HERC5Q9UII4 1024 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 GOLGA8IPA6NC78 632 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 MATN2O00339 956 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 USP1O94782 785 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 OXSR1O95747 527 aaPredicted RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 RPA1P27694 616 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 STAT1P42224 750 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 OVGP1Q12889 678 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 LPIN1Q14693 890 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 TRIM16LQ309B1 348 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 CRY2Q49AN0 593 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 FOXB2Q5VYV0 432 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 RINT1Q6NUQ1 792 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 TMC5Q6UXY8 1006 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 PRR23CQ6ZRP0 262 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms