RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CNTN6Q9UQ52 1028 aa28.95■■■□□ 2.23
HDAC3-201ENST00000305264 PDXDC1Q6P996 788 aa28.95■■■□□ 2.22
HDAC3-201ENST00000305264 FAM71AQ8IYT1 594 aa28.95■■■□□ 2.22
HDAC3-201ENST00000305264 MYO9BQ13459 2157 aa28.95■■■□□ 2.22
HDAC3-201ENST00000305264 ZNF132P52740 706 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 RAD23BP54727 409 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 ERVFC1P60507 584 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 PSMC1P62191 440 aaKnown RBP28.94■■■□□ 2.22
HDAC3-201ENST00000305264 UBE3AQ05086 875 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 CAMK1Q14012 370 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 CCDC142Q17RM4 750 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 E4F1Q66K89 784 aaPredicted RBP28.94■■■□□ 2.22
HDAC3-201ENST00000305264 ZNF280DQ6N043 979 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 ANKS3Q6ZW76 656 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 UNC93AQ86WB7 457 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 TTC39CQ8N584 583 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 TMEM209Q96SK2 561 aa28.94■■■□□ 2.22
HDAC3-201ENST00000305264 LUC7L2Q9Y383 392 aaKnown RBP28.94■■■□□ 2.22
HDAC3-201ENST00000305264 SOX1O00570 391 aaPredicted RBP28.93■■■□□ 2.22
HDAC3-201ENST00000305264 CALCAP01258 141 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 CTSAP10619 480 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 SOX5P35711 763 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 ZBED6P86452 979 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 PSMD5Q16401 504 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 CTXN3Q4LDR2 81 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 RSPO2Q6UXX9 243 aaPredicted RBP28.93■■■□□ 2.22
HDAC3-201ENST00000305264 TCF25Q9BQ70 676 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 NT5C1AQ9BXI3 368 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 ACP6Q9NPH0 428 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 TLR9Q9NR96 1032 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 GFPT2O94808 682 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 RPL17P18621 184 aaKnown RBP28.93■■■□□ 2.22
HDAC3-201ENST00000305264 PTPN14Q15678 1187 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 TMC7Q7Z402 723 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 ACOT1Q86TX2 421 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 THEM5Q8N1Q8 247 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 SLC4A11Q8NBS3 891 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 LPIN3Q9BQK8 851 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 ENTPD7Q9NQZ7 604 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 PCDHGC5Q9Y5F6 944 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 MYO7AQ13402 2215 aa28.93■■■□□ 2.22
HDAC3-201ENST00000305264 CYP26A1O43174 497 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 TBC1D4O60343 1298 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 MFAP3LO75121 409 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ATP2C2O75185 946 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 KRT9P35527 623 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 STAT1P42224 750 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ADKP55263 362 aaKnown RBP28.92■■■□□ 2.22
HDAC3-201ENST00000305264 SYT15Q9BQS2 421 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ZNF576Q9H609 170 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 MRPL17Q9NRX2 175 aaKnown RBP28.92■■■□□ 2.22
HDAC3-201ENST00000305264 MTRRQ9UBK8 725 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 MYO6Q9UM54 1294 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 TPM1P09493 284 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 PCSK1P29120 753 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 CLCN1P35523 988 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ZNF397Q8NF99 534 aaPredicted RBP28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ANP32BQ92688 251 aaKnown RBP28.92■■■□□ 2.22
HDAC3-201ENST00000305264 TMEM176AQ96HP8 235 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 ACBD6Q9BR61 282 aa28.92■■■□□ 2.22
HDAC3-201ENST00000305264 H7C4K7 107 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 RFXAPO00287 272 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 OR4Q2P0C623 313 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 CDR1P51861 262 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 ARID5AQ03989 594 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 PLPP4Q5VZY2 271 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 CRTAC1Q9NQ79 661 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 SZT2Q5T011 3432 aa28.91■■■□□ 2.22
HDAC3-201ENST00000305264 ADAM12O43184 909 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 LILRB3O75022 631 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 CA8P35219 290 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 IRS1P35568 1242 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 B3GALNT2Q8NCR0 500 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 CDH9Q9ULB4 789 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 CDY1Q9Y6F8 540 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 INTS6LQ5JSJ4 861 aaKnown RBP28.9■■■□□ 2.22
HDAC3-201ENST00000305264 SLC47A2Q86VL8 602 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 C12orf29Q8N999 325 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 BACE2Q9Y5Z0 518 aa28.9■■■□□ 2.22
HDAC3-201ENST00000305264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.89■■■□□ 2.22
HDAC3-201ENST00000305264 AKR1B15C9JRZ8 316 aaPredicted RBP28.89■■■□□ 2.22
HDAC3-201ENST00000305264 FSCN2O14926 492 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 SFMBT2Q5VUG0 894 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 LRRTM3Q86VH5 581 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 GLYCTKQ8IVS8 523 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 CRYBG2Q8N1P7 616 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 TC2NQ8N9U0 490 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 TNIP3Q96KP6 325 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 PKMYT1Q99640 499 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 CLSTN3Q9BQT9 956 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 TTYH1Q9H313 450 aaPredicted RBP28.89■■■□□ 2.22
HDAC3-201ENST00000305264 IMPACTQ9P2X3 320 aa28.89■■■□□ 2.22
HDAC3-201ENST00000305264 MYBPHLA2RUH7 354 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 OR6C75A6NL08 312 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 HIDE1A8MVS5 230 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 PTPN1P18031 435 aaKnown RBP28.88■■■□□ 2.21
HDAC3-201ENST00000305264 CNGA4Q8IV77 575 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 LRCH3Q96II8 777 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 DNAJC7Q99615 494 aa28.88■■■□□ 2.21
HDAC3-201ENST00000305264 ZCWPW1Q9H0M4 648 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms