RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SIGLEC16A6NMB1 481 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 TNPO2O14787 897 aaKnown RBP20.56■□□□□ 0.88
HOXC4-201ENST00000303406 AKR1A1P14550 325 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 PTPN7P35236 360 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 GABRB2P47870 512 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 CDH8P55286 799 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 TAS2R40P59535 323 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 COPS2P61201 443 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 KLF1Q13351 362 aaPredicted RBP20.56■□□□□ 0.88
HOXC4-201ENST00000303406 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
HOXC4-201ENST00000303406 PTPN20Q4JDL3 420 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 SGO2Q562F6 1265 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 DCUN1D2Q6PH85 259 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 ALKAL1Q6UXT8 129 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 RUFY4Q6ZNE9 571 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 RCOR2Q8IZ40 523 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 BEST2Q8NFU1 509 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 GRK7Q8WTQ7 553 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 FMO2Q99518 471 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 OSMRQ99650 979 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 MIS12Q9H081 205 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 DPH5Q9H2P9 285 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 C17orf102A2RUQ5 167 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 PPFIA2O75334 1257 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 ECEL1O95672 775 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 MYL3P08590 195 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 FGFR4P22455 802 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 TMC3Q7Z5M5 1100 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 CCDC105Q8IYK2 499 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 TWNKQ96RR1 684 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 TXLNGYQ9BZA5 131 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 FAM204AQ9H8W3 233 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 DDX56Q9NY93 547 aaKnown RBP20.55■□□□□ 0.88
HOXC4-201ENST00000303406 SNTG2Q9NY99 539 aa20.55■□□□□ 0.88
HOXC4-201ENST00000303406 PDCD11Q14690 1871 aaKnown RBP20.55■□□□□ 0.88
HOXC4-201ENST00000303406 O00370 1275 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 DUSP11O75319 330 aaKnown RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 MICAL2O94851 1124 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 HSD17B3P37058 310 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 CRYBB1P53674 252 aaPredicted RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 RPL7AP62424 266 aaKnown RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 ZNF252P-AS1Q0IIN9 211 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 SNX17Q15036 470 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 POLNQ7Z5Q5 900 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 RIN2Q8WYP3 895 aaPredicted RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 MCEEQ96PE7 176 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 DCLK3Q9C098 648 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 CDHR5Q9HBB8 845 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 GRHL1Q9NZI5 618 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 UBQLN1Q9UMX0 589 aaKnown RBP20.54■□□□□ 0.88
HOXC4-201ENST00000303406 TLL2Q9Y6L7 1015 aa20.54■□□□□ 0.88
HOXC4-201ENST00000303406 GOLGA6CA6NDK9 693 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 FAM155AB1AL88 458 aaPredicted RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 GOLGA6DP0CG33 693 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 TM4SF4P48230 202 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 NKX3-2P78367 333 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 PURAQ00577 322 aaKnown RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 HIC1Q14526 733 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 ACAP1Q15027 740 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 CCNG2Q16589 344 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 XKR4Q5GH76 650 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 TAF2Q6P1X5 1199 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 LCLAT1Q6UWP7 414 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 ZDHHC24Q6UX98 284 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 DNAJB3Q8WWF6 145 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 NT5C1AQ9BXI3 368 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 OSBPL8Q9BZF1 889 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 GOLGA6AQ9NYA3 693 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 XPOTO43592 962 aaKnown RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 CAPN15O75808 1086 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 CD4P01730 458 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 ATF7P17544 494 aaPredicted RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 TMEM62Q0P6H9 643 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 UAP1Q16222 522 aaPredicted RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 FAM76AQ8TAV0 307 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 MCRS1Q96EZ8 462 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 EIF2AQ9BY44 585 aaKnown RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 WHRNQ9P202 907 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 MTRF1LQ9UGC7 380 aaKnown RBP20.53■□□□□ 0.88
HOXC4-201ENST00000303406 CYTH4Q9UIA0 394 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 USTQ9Y2C2 406 aa20.53■□□□□ 0.88
HOXC4-201ENST00000303406 H0YGN5 161 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 TREHO43280 583 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 GJB6O95452 261 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 SETSIPP0DME0 302 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 RALAP11233 206 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 KRT3P12035 628 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 KCNE1P15382 129 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 GPD2P43304 727 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 RPL21P46778 160 aaKnown RBP20.52■□□□□ 0.87
HOXC4-201ENST00000303406 NDST1P52848 882 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 GJA9P57773 515 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 PSMC1P62191 440 aaKnown RBP20.52■□□□□ 0.87
HOXC4-201ENST00000303406 OGDHQ02218 1023 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 CRHR2Q13324 411 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 PTK6Q13882 451 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 ZNF771Q7L3S4 317 aaPredicted RBP20.52■□□□□ 0.87
HOXC4-201ENST00000303406 UNC93AQ86WB7 457 aa20.52■□□□□ 0.87
HOXC4-201ENST00000303406 XYLT1Q86Y38 959 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms