RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 CDY2AQ9Y6F7 541 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 CDY1Q9Y6F8 540 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 CD4P01730 458 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 ARHGDIAP52565 204 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 KCNMA1Q12791 1236 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 BTBD8Q5XKL5 378 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 WDR59Q6PJI9 974 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 NLRP9Q7RTR0 991 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 CNGA3Q16281 694 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 SV2AQ7L0J3 742 aa20.19■□□□□ 0.82
TSR1-201ENST00000301364 GRAP2O75791 330 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 PCNX4Q63HM2 1172 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 SPATA31A6Q5VVP1 1343 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 GYS1P13807 737 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 VHLP40337 213 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 PGM2Q96G03 612 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSR1-201ENST00000301364 RIC1Q4ADV7 1423 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 RIPK2O43353 540 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 LSM8O95777 96 aaKnown RBP20.18■□□□□ 0.82
TSR1-201ENST00000301364 IL10P22301 178 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 NSUN2Q08J23 767 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSR1-201ENST00000301364 C16orf89Q6UX73 402 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 SETD3Q86TU7 594 aaPredicted RBP20.18■□□□□ 0.82
TSR1-201ENST00000301364 RNF135Q8IUD6 432 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 ASAP3Q8TDY4 903 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 PRMT6Q96LA8 375 aaPredicted RBP20.18■□□□□ 0.82
TSR1-201ENST00000301364 CGRRF1Q99675 332 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 CYP2C8P10632 490 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 HPDLQ96IR7 371 aa20.18■□□□□ 0.82
TSR1-201ENST00000301364 ATRNO75882 1429 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 DDTLA6NHG4 134 aaPredicted RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 PDE2AO00408 941 aaPredicted RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 MTSS1O43312 755 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 TARSP26639 723 aaKnown RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 CHI3L2Q15782 390 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 EFHC1Q5JVL4 640 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 MIIPQ5JXC2 388 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 ARID3BQ8IVW6 561 aaPredicted RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 SLC25A27O95847 323 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 KCNK18Q7Z418 384 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 KIAA1257Q9ULG3 409 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 E2F6O75461 281 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 SLITRK3O94933 977 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 KCNA3P22001 575 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 HNRNPH3P31942 346 aaKnown RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 USP10Q14694 798 aaKnown RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 PBXIP1Q96AQ6 731 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 PPP1R2P1Q96PQ5 205 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 SLC12A3P55017 1021 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 FAM111AQ96PZ2 611 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 PRDM4Q9UKN5 801 aa20.17■□□□□ 0.82
TSR1-201ENST00000301364 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
TSR1-201ENST00000301364 COL5A2P05997 1499 aaPredicted RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 EEF2KO00418 725 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 TMEM154Q6P9G4 183 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 OTOP1Q7RTM1 612 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 PRPF39Q86UA1 669 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 CD302Q8IX05 232 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 TSEN2Q8NCE0 465 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 NCLNQ969V3 563 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 SH3GL3Q99963 347 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 ERAP1Q9NZ08 941 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 FRMPD4Q14CM0 1322 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 DFFAO00273 331 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 NFKBIAP25963 317 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 ZBTB17Q13105 803 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 MTM1Q13496 603 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 HABP4Q5JVS0 413 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 LRRC8EQ6NSJ5 796 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 EFCAB12Q6NXP0 572 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 FOXR2Q6PJQ5 311 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 LRRC55Q6ZSA7 311 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 FBXO36Q8NEA4 188 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 TSPAN17Q96FV3 270 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 MYOZ2Q9NPC6 264 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 PCDHA3Q9Y5H8 950 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 FAM86B1E9PN63 330 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 MOCS2O96007 188 aaPredicted RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 GH1P01241 217 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 FAM86B2P0C5J1 330 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 MYL2P10916 166 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 ACADSP16219 412 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 C1QBPQ07021 282 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 CCNJLQ8IV13 435 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 LRRC71Q8N4P6 559 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 UBA3Q8TBC4 463 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 MRPL1Q9BYD6 325 aaKnown RBP20.16■□□□□ 0.82
TSR1-201ENST00000301364 HEY2Q9UBP5 337 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 PBX1P40424 430 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 DNAAF5Q86Y56 855 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 RXFP1Q9HBX9 757 aa20.16■□□□□ 0.82
TSR1-201ENST00000301364 LOC102724159A0A0B4J2E5 919 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 IRX1P78414 480 aaPredicted RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 PWP2Q15269 919 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 SPOCD1Q6ZMY3 1216 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 AGO4Q9HCK5 861 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms