RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 HHATQ5VTY9 493 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
CAGE1-201ENST00000296742 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
CAGE1-201ENST00000296742 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
CAGE1-201ENST00000296742 TP73O15350 636 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 TBX10O75333 385 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 RFX8Q6ZV50 586 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 MTDHQ86UE4 582 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 PPM1KQ8N3J5 372 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 GTPBP10A4D1E9 387 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 CLDN3O15551 220 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 LYPLA2O95372 231 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 PGK2P07205 417 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 ETS2P15036 469 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 ITGA8P53708 1063 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 MCL1Q07820 350 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 ZRSR2Q15696 482 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 STMN2Q93045 179 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 MRRFQ96E11 262 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 CADM1Q9BY67 442 aaKnown RBP13.16□□□□□ -0.3
CAGE1-201ENST00000296742 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 NPHS2Q9NP85 383 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 DCTN4Q9UJW0 460 aa13.16□□□□□ -0.3
CAGE1-201ENST00000296742 MROH7Q68CQ1 1323 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 OCRLQ01968 901 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SGO2Q562F6 1265 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
CAGE1-201ENST00000296742 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 UBE4BO95155 1302 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 STBD1O95210 358 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 ASMTLO95671 621 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 NCKAP1LP55160 1127 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SEZ6Q53EL9 994 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 C10orf82Q8WW14 230 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
CAGE1-201ENST00000296742 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 MAP3K7O43318 606 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 GGPS1O95749 300 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 PSAPP07602 524 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 MXI1P50539 228 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 NFIL3Q16649 462 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 GATA6Q92908 595 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 MCUR1Q96AQ8 359 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
CAGE1-201ENST00000296742 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 CYP26B1Q9NR63 512 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 WHRNQ9P202 907 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
CAGE1-201ENST00000296742 FDX1P10109 184 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 ADCY8P40145 1251 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 NEK3P51956 506 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 CYP1B1Q16678 543 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 KBTBD2Q8IY47 623 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
CAGE1-201ENST00000296742 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms