RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 STRIP2Q9ULQ0 834 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 F8VP50 259 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 PFASO15067 1338 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ENDOD1O94919 500 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 EGFRP00533 1210 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 RABGGTBP53611 331 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CRADDP78560 199 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 MXD4Q14582 209 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 RGS9BPQ6ZS82 235 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 PDZD4Q76G19 769 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 MYH14Q7Z406 1995 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 FAM131BQ86XD5 332 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CRLF3Q8IUI8 442 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 AGBL3Q8NEM8 1001 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ATP6V1E2Q96A05 226 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ERP27Q96DN0 273 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SPATA17Q96L03 361 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 KCTD10Q9H3F6 313 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 VIPAS39Q9H9C1 493 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ERVK-5Q9HDB9 667 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 KLC4Q9NSK0 619 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 HACD3Q9P035 362 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 WRAP73Q9P2S5 460 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 UBA6A0AVT1 1052 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 TNPO2O14787 897 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 OPLAHO14841 1288 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 PSMD10O75832 226 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 CYP2C9P11712 490 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 GNL1P36915 607 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 OTUD4Q01804 1114 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 ITGB3BPQ13352 177 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 TAF1CQ15572 869 aaPredicted RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 ATP11CQ8NB49 1132 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 SGF29Q96ES7 293 aa5.02□□□□□ -1.61
UBR1-201ENST00000290650 ZC3H7BQ9UGR2 993 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 CPSF3Q9UKF6 684 aaKnown RBP5.02□□□□□ -1.61
UBR1-201ENST00000290650 TCRBV7S2A1N4TA0A589 114 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 MEFVO15553 781 aaPredicted RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 GPC4O75487 556 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 NCAM1P13591 858 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 CCDC130P13994 396 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 ADCYAP1R1P41586 468 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 BEX3Q00994 111 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 MMRN1Q13201 1228 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 PTK7Q13308 1070 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 MEA1Q16626 185 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 JADE1Q6IE81 842 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 PARP9Q8IXQ6 854 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 RCOR2Q8IZ40 523 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 CEP120Q8N960 986 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 APPL2Q8NEU8 664 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 ASAP3Q8TDY4 903 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SPATC1LQ9H0A9 340 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 AIPL1Q9NZN9 384 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 CACNA1SQ13698 1873 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 NWD2Q9ULI1 1742 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 C19orf81C9J6K1 198 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 B4GALT5O43286 388 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TGFB1I1O43294 461 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TYK2P29597 1187 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SSTR1P30872 391 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TNFAIP2Q03169 654 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 BMPR2Q13873 1038 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TMEM132BQ14DG7 1078 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 KIF19Q2TAC6 998 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 GRAMD1BQ3KR37 738 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TMEM259Q4ZIN3 620 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 GNASQ5JWF2 1037 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SPATA21Q7Z572 469 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 ARHGAP24Q8N264 748 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 C12orf29Q8N999 325 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 EDEM1Q92611 657 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SEMA4DQ92854 862 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SPDL1Q96EA4 605 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 FAM81BQ96LP2 452 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 FAM111AQ96PZ2 611 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TRIM55Q9BYV6 548 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 NIF3L1Q9GZT8 377 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 GANQ9H2C0 597 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 ERAP1Q9NZ08 941 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 UVRAGQ9P2Y5 699 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 AFF4Q9UHB7 1163 aaKnown RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 DNPEPQ9ULA0 475 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 DUOX1Q9NRD9 1551 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 NUMA1Q14980 2115 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 IRF6O14896 467 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 NOL4O94818 638 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 INSRRP14616 1297 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 MAP3K7CLP57077 242 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 C15orf59Q2T9L4 293 aaPredicted RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 ARMC2Q8NEN0 867 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 TMC2Q8TDI7 906 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SYN2Q92777 582 aaPredicted RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 NT5C1AQ9BXI3 368 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 PRG3Q9Y2Y8 225 aaPredicted RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.01□□□□□ -1.61
UBR1-201ENST00000290650 NUP188Q5SRE5 1749 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 MYO10Q9HD67 2058 aa5.01□□□□□ -1.61
UBR1-201ENST00000290650 LOC100653049A0A140TA62 436 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms