RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PCDHA9Q9Y5H5 950 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 HCFC2Q9Y5Z7 792 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 TNS2Q63HR2 1409 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 FLT4P35916 1363 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 IRS2Q9Y4H2 1338 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 C17orf113A0A1B0GUU1 675 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 A0A1W2PPH5 198 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 FFAR2O15552 330 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 DOK2O60496 412 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 MGEA5O60502 916 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 B3GALNT1O75752 331 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SASH1O94885 1247 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 THP07101 528 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SLC3A2P08195 630 aaKnown RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 SRGAP2CP0DJJ0 459 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 ZSCAN22P10073 491 aaPredicted RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 STMN1P16949 149 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 TNNT3P45378 269 aaPredicted RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 FXR1P51114 621 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-202ENST00000278385 AGFG1P52594 562 aaKnown RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 NR1H2P55055 460 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 GALNT1Q10472 559 aaPredicted RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 IFT88Q13099 833 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 STARD3Q14849 445 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 CNN3Q15417 329 aaKnown RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 SLC15A2Q16348 729 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 HSP90AB3PQ58FF7 597 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 EMC4Q5J8M3 183 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 BROXQ5VW32 411 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SLC30A6Q6NXT4 461 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 APOA5Q6Q788 366 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 LMBR1LQ6UX01 489 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 PTF1AQ7RTS3 328 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 B3GNT8Q7Z7M8 397 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SIAH1Q8IUQ4 282 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 IGDCC3Q8IVU1 814 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 FAM126BQ8IXS8 530 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 IGSF22Q8N9C0 903 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 NAT8LQ8N9F0 302 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 MIGA1Q8NAN2 632 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SMARCC2Q8TAQ2 1214 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 PIP4K2CQ8TBX8 421 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 WRNIP1Q96S55 665 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SLF1Q9BQI6 1058 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 TXLNGYQ9BZA5 131 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 BTBD1Q9H0C5 482 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 GHITMQ9H3K2 345 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 BCAS3Q9H6U6 928 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 TRPV4Q9HBA0 871 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SPON1Q9HCB6 807 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 CABP5Q9NP86 173 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 POLKQ9UBT6 870 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 FBLN5Q9UBX5 448 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 ZHX1Q9UKY1 873 aaPredicted RBP5.08□□□□□ -1.6
CD44-202ENST00000278385 DSEQ9UL01 958 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 DENND2AQ9ULE3 1009 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 SMC3Q9UQE7 1217 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 KNSTRNQ9Y448 316 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 ATP6V0A2Q9Y487 856 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 PCDHA8Q9Y5H6 950 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 BRWD3Q6RI45 1802 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 COL18A1P39060 1754 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 AKAP12Q02952 1782 aa5.08□□□□□ -1.6
CD44-202ENST00000278385 MON2Q7Z3U7 1717 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 CAPN8A6NHC0 703 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 GOLGA8AA7E2F4 631 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 GOLGA8BA8MQT2 603 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 TMEM110-MUSTN1A8MSY1 372 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 IPO5O00410 1097 aaKnown RBP5.07□□□□□ -1.6
CD44-202ENST00000278385 MSCO60682 206 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 FGF18O76093 207 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 URI1O94763 535 aaPredicted RBP5.07□□□□□ -1.6
CD44-202ENST00000278385 CCDC159P0C7I6 412 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 COL6A2P12110 1019 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 ALOX12P18054 663 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 LIMS1P48059 325 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 DNM2P50570 870 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 MRPS35P82673 323 aaKnown RBP5.07□□□□□ -1.6
CD44-202ENST00000278385 ZNF543Q08ER8 600 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 FOXO1Q12778 655 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 FZD5Q13467 585 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 SSPNQ14714 243 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 SLMAPQ14BN4 828 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 POLD3Q15054 466 aaPredicted RBP5.07□□□□□ -1.6
CD44-202ENST00000278385 ANO6Q4KMQ2 910 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 FBXO47Q5MNV8 452 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 GALNT17Q6IS24 598 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 USP45Q70EL2 814 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 BTN2A1Q7KYR7 527 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 FAM129CQ86XR2 697 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 EPHX4Q8IUS5 362 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 GALNT15Q8N3T1 639 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 PRR18Q8N4B5 295 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 TTLL6Q8N841 843 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 WDR48Q8TAF3 677 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 RSAD2Q8WXG1 361 aa5.07□□□□□ -1.6
CD44-202ENST00000278385 RFFLQ8WZ73 363 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms