RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZNF862O60290 1169 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 SUN1O94901 812 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 ACSL3O95573 720 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 LDHAP00338 332 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 NR3C2P08235 984 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 KCNA2P16389 499 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 NR1H3Q13133 447 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 GJC2Q5T442 439 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 PLEKHA7Q6IQ23 1121 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 DRICH1Q6PGQ1 229 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 ARHGEF18Q6ZSZ5 1173 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 ZNF365Q70YC5 407 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 UHMK1Q8TAS1 419 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 CKAP2Q8WWK9 683 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 DPF3Q92784 378 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 GRAMD1AQ96CP6 724 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 BICD1Q96G01 975 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 NCAPGQ9BPX3 1015 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■■■ 164
C9orf3-201ENST00000277198 CYP26B1Q9NR63 512 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 ACO1P21399 889 aaKnown RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 CHKAP35790 457 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 LIG4P49917 911 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 PPARDQ03181 441 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 SNX1Q13596 522 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 PREPLQ4J6C6 727 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 XKR3Q5GH77 459 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 TMEM63BQ5T3F8 832 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 UBAP2Q5T6F2 1119 aaKnown RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 CRELD2Q6UXH1 353 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 PPP1R21Q6ZMI0 780 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 ZNF516Q92618 1163 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 OSBPL8Q9BZF1 889 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 PPCSQ9HAB8 311 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
C9orf3-201ENST00000277198 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
C9orf3-201ENST00000277198 PGK1P00558 417 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 SLC18A1P54219 525 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 STRN3Q13033 797 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 CUL2Q13617 745 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 PRPF38BQ5VTL8 546 aaKnown RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 EEPD1Q7L9B9 569 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 TAS1R3Q7RTX0 852 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 CCDC63Q8NA47 563 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 CPA5Q8WXQ8 436 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 PI4K2AQ9BTU6 479 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 KATNBL1Q9H079 304 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 JPH1Q9HDC5 661 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 ADAM22Q9P0K1 906 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 A0A1B0GUA9 196 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 RALAP11233 206 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 COL6A1P12109 1028 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 TNNI1P19237 187 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 AP3M2P53677 418 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 NOMO3P69849 1222 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 ELF3P78545 371 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 MCL1Q07820 350 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 KYNUQ16719 465 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 HIBCHQ6NVY1 386 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 ATG4AQ8WYN0 398 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 RBM41Q96IZ5 413 aaKnown RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 TTC25Q96NG3 672 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 GEMIN8Q9NWZ8 242 aaKnown RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 AGO2Q9UKV8 859 aaKnown RBP13.65□□□□□ -0.22
C9orf3-201ENST00000277198 ARL2BPQ9Y2Y0 163 aa13.65□□□□□ -0.22
C9orf3-201ENST00000277198 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-201ENST00000277198 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 GJB6O95452 261 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 BRAFP15056 766 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 KLRC2P26717 231 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 PIK3CAP42336 1068 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 IFNAR2P48551 515 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 COPS2P61201 443 aa13.64□□□□□ -0.23
C9orf3-201ENST00000277198 GNPTABQ3T906 1256 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms