RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ZNF483Q8TF39 744 aaPredicted RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 RIN2Q8WYP3 895 aaPredicted RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 PPP2R3CQ969Q6 453 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 CHP1Q99653 195 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 UBXN8O00124 270 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 DNALI1O14645 258 aaPredicted RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TBX3O15119 743 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ATP5BP06576 529 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 RBP5P82980 135 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ILF2Q12905 390 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIM25Q14258 630 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF341Q9BYN7 854 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TMEM117Q9H0C3 514 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 DMAP1Q9NPF5 467 aaPredicted RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 HEY2Q9UBP5 337 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 PDE9AO76083 593 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CYBBP04839 570 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CNTFP26441 200 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 STIP1P31948 543 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ATXN3P54252 364 aaPredicted RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SNAP25P60880 206 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CNTN1Q12860 1018 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 EFHC1Q5JVL4 640 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ARHGAP22Q7Z5H3 698 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 TMBIM4Q9HC24 238 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 BTBD7Q9P203 1132 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 DAPK2Q9UIK4 370 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 TMCC3Q9ULS5 477 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ATP7BP35670 1465 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PNMA8CA0A1B0GUJ8 204 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 DGKIO75912 1065 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 MED26O95402 600 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PRLRP16471 622 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 IL12RB1P42701 662 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ACCSLQ4AC99 568 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 RAD9BQ6WBX8 426 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP4Z1Q86W10 505 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CENPLQ8N0S6 344 aaPredicted RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ANKS1AQ92625 1134 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ATAD3AQ9NVI7 634 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PDS5AQ29RF7 1337 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 VWA5AO00534 786 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM200BP0CF97 657 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 LCP1P13796 627 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 POU4F1Q01851 419 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC29A2Q14542 456 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 KCNV1Q6PIU1 500 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 KIF12Q96FN5 646 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CATSPERBQ9H7T0 1116 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 L2HGDHQ9H9P8 463 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 RHOBTB1O94844 696 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PGK2P07205 417 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 COMTP21964 271 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CPA2P48052 419 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 C1DQ13901 141 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP39Q53GS9 565 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 AGAP9Q5VTM2 703 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CROCCP3Q8IVE0 287 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 RBBP8NLQ8NC74 664 aaPredicted RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 IRX2Q9BZI1 471 aaPredicted RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT84Q9NSB2 600 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 RGL1Q9NZL6 768 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 BCL10O95999 233 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT6BP04259 564 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT6CP48668 564 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SNX17Q15036 470 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PCNX4Q63HM2 1172 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 SWSAP1Q6NVH7 229 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 CHMP1BQ7LBR1 199 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PCDHB2Q9Y5E7 798 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PCDHA10Q9Y5I2 948 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PRR23AA6NEV1 266 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 PSTPIP1O43586 416 aa9.06□□□□□ -0.96
SCUBE3-201ENST00000274938 GH2P01242 217 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms