RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 KCNA1Q09470 495 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 DHX8Q14562 1220 aaKnown RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 PUM1Q14671 1186 aaKnown RBP eCLIP9.71□□□□□ -0.861e-11■■□□□ 13.1
TPM3-201ENST00000271850 RABEP1Q15276 862 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 LPAL2Q16609 132 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 CCDC142Q17RM4 750 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 OVOS1Q6IE37 1185 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 IQCEQ6IPM2 695 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 PKN3Q6P5Z2 889 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 DNAJB7Q7Z6W7 309 aaPredicted RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 ARID3BQ8IVW6 561 aaPredicted RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 LEMD2Q8NC56 503 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 TTC8Q8TAM2 541 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 CXorf38Q8TB03 319 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 RAD54LQ92698 747 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 PSMG2Q969U7 264 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 BICD1Q96G01 975 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 STRA6Q9BX79 667 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 FGFBP2Q9BYJ0 223 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 ZCWPW1Q9H0M4 648 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 TMLHEQ9NVH6 421 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 GTSE1Q9NYZ3 720 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 LARSQ9P2J5 1176 aaKnown RBP9.71□□□□□ -0.86
TPM3-201ENST00000271850 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 ACACBO00763 2458 aa9.71□□□□□ -0.86
TPM3-201ENST00000271850 OBSL1O75147 1896 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MYBPHLA2RUH7 354 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MAN2B1O00754 1011 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 ZNF263O14978 683 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 CHADO15335 359 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 TRAK2O60296 914 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MARCKSP29966 332 aaPredicted RBP9.7□□□□□ -0.86
TPM3-201ENST00000271850 CTHP32929 405 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.86
TPM3-201ENST00000271850 GPR15P49685 360 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 ACOT2P49753 483 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PRR20EP86478 221 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PRR20CP86479 221 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PRR20DP86480 221 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PRR20BP86481 221 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PRR20AP86496 221 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MYBPC2Q14324 1141 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 PTPAQ15257 358 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 NAIF1Q69YI7 327 aaPredicted RBP9.7□□□□□ -0.86
TPM3-201ENST00000271850 DSTYKQ6XUX3 929 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 ELMOD1Q8N336 334 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MYCT1Q8N699 235 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 ATRIPQ8WXE1 791 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MSTO1Q9BUK6 570 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 RPF1Q9H9Y2 349 aaKnown RBP9.7□□□□□ -0.86
TPM3-201ENST00000271850 PARVGQ9HBI0 331 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 POLR3BQ9NW08 1133 aaPredicted RBP9.7□□□□□ -0.86
TPM3-201ENST00000271850 CCL26Q9Y258 94 aa9.7□□□□□ -0.86
TPM3-201ENST00000271850 MRPS17Q9Y2R5 130 aaKnown RBP9.7□□□□□ -0.86
TPM3-201ENST00000271850 LAMA1P25391 3075 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 CHURC1-FNTBB4DL54 471 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 SPECC1L-ADORA2AF8WAN1 911 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 NCAM2O15394 837 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 HCRTO43612 131 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 TADA3O75528 432 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 PAPSS2O95340 614 aaPredicted RBP9.69□□□□□ -0.86
TPM3-201ENST00000271850 HMGA1P17096 107 aaKnown RBP9.69□□□□□ -0.86
TPM3-201ENST00000271850 GABRR2P28476 465 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 FNTBP49356 437 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 CASP5P51878 434 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 MLLT6P55198 1093 aaPredicted RBP9.69□□□□□ -0.86
TPM3-201ENST00000271850 CCINQ13939 588 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 TMEM132DQ14C87 1099 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 SF3A1Q15459 793 aaKnown RBP9.69□□□□□ -0.86
TPM3-201ENST00000271850 SLC39A12Q504Y0 691 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 GPR158Q5T848 1215 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 DENND4CQ5VZ89 1909 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 WSCD1Q658N2 575 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 SFR1Q86XK3 245 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 EPSTI1Q96J88 318 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 AK8Q96MA6 479 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 PKMYT1Q99640 499 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 SLC46A2Q9BY10 475 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 ST6GALNAC4Q9H4F1 302 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 SLITRK6Q9H5Y7 841 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 CHD8Q9HCK8 2581 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 HPS4Q9NQG7 708 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 NCDNQ9UBB6 729 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 CLIC4Q9Y696 253 aa9.69□□□□□ -0.86
TPM3-201ENST00000271850 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.69□□□□□ -0.86
TPM3-201ENST00000271850 WDFY3Q8IZQ1 3526 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 A0A087X0B3 334 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 MYMKA6NI61 221 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 H0YCG3 227 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 SLC26A4O43511 780 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 EIF5BO60841 1220 aaKnown RBP9.68□□□□□ -0.86
TPM3-201ENST00000271850 FAM13AO94988 1023 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 ODC1P11926 461 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 WEE1P30291 646 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 CCR3P51677 355 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 EPHB3P54753 998 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 SPEM2Q0P670 501 aa9.68□□□□□ -0.86
TPM3-201ENST00000271850 PLD1Q13393 1074 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms