RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GPR88Q9GZN0 384 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 PRKAG3Q9UGI9 489 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 ADAM28Q9UKQ2 775 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 PCDHA13Q9Y5I0 950 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 CASTOR2A6NHX0 329 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 URODP06132 367 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 BRSK2Q8IWQ3 736 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 ZNF516Q92618 1163 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 RABGGTAQ92696 567 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 HERC2P3Q9BVR0 1158 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 TSGA10Q9BZW7 698 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 RAB20Q9NX57 234 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 CACNG4Q9UBN1 327 aa26.33■■□□□ 1.8
SSBP4-201ENST00000270061 PDCD11Q14690 1871 aaKnown RBP26.32■■□□□ 1.8
SSBP4-201ENST00000270061 KRT86O43790 486 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 CCDC172P0C7W6 258 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 HARSP12081 509 aaKnown RBP26.32■■□□□ 1.8
SSBP4-201ENST00000270061 CYP27A1Q02318 531 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 SLC18A3Q16572 532 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 ANKRD54Q6NXT1 300 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 RNF168Q8IYW5 571 aaPredicted RBP26.32■■□□□ 1.8
SSBP4-201ENST00000270061 TXLNBQ8N3L3 684 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 SEMA4DQ92854 862 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 PAAF1Q9BRP4 392 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 EMILIN2Q9BXX0 1053 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 SSX2IPQ9Y2D8 614 aa26.32■■□□□ 1.8
SSBP4-201ENST00000270061 C2CD2LO14523 706 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 TADA2AO75478 443 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 EFEMP2O95967 443 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 C4BPAP04003 597 aaKnown RBP26.31■■□□□ 1.8
SSBP4-201ENST00000270061 ARID5AQ03989 594 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 NAB2Q15742 525 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 ZACNQ401N2 412 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 GLRA4Q5JXX5 417 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 ZBTB41Q5SVQ8 909 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 FUT10Q6P4F1 479 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 TAS1R1Q7RTX1 841 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 JAKMIP2Q96AA8 810 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 ACAP3Q96P50 834 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 CGRRF1Q99675 332 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 PDE11AQ9HCR9 933 aa26.31■■□□□ 1.8
SSBP4-201ENST00000270061 UBE2TQ9NPD8 197 aaPredicted RBP26.31■■□□□ 1.8
SSBP4-201ENST00000270061 GFPT2O94808 682 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 ABL1P00519 1130 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 HOXB8P17481 243 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 SSTR3P32745 418 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 PTK2Q05397 1052 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 SURF1Q15526 300 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 KIAA1841Q6NSI8 718 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 ARHGEF19Q8IW93 802 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 GJD3Q8N144 294 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 TAS1R2Q8TE23 839 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 WDR24Q96S15 920 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 CPSF3Q9UKF6 684 aaKnown RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 PJA2O43164 708 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 LILRB3O75022 631 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 GLUD2P49448 558 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 AP3M2P53677 418 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 WNT7BP56706 349 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 GFPT1Q06210 699 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 CCDC122Q5T0U0 273 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 ZNF571Q7Z3V5 609 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 ADHFE1Q8IWW8 467 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 FAM81BQ96LP2 452 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 PPP1R10Q96QC0 940 aaKnown RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 IRX2Q9BZI1 471 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 GPR62Q9BZJ7 368 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 CD320Q9NPF0 282 aa26.3■■□□□ 1.8
SSBP4-201ENST00000270061 LUC7LQ9NQ29 371 aaKnown RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 USP15Q9Y4E8 981 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-201ENST00000270061 RCCD1A6NED2 376 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 FANCGO15287 622 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 LRRN2O75325 713 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 CNPP09543 421 aaKnown RBP26.29■■□□□ 1.8
SSBP4-201ENST00000270061 TNNI1P19237 187 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 CASQ1P31415 396 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 MAGEA1P43355 309 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 POU5F1Q01860 360 aaKnown RBP26.29■■□□□ 1.8
SSBP4-201ENST00000270061 ZP2Q05996 745 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 KIF5AQ12840 1032 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 C10orf76Q5T2E6 689 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 ALKAL1Q6UXT8 129 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 GPIHBP1Q8IV16 184 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 MYRIPQ8NFW9 859 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 KLHL5Q96PQ7 755 aa26.29■■□□□ 1.8
SSBP4-201ENST00000270061 SF3B1O75533 1304 aaKnown RBP eCLIP26.29■■□□□ 1.84e-6■■■■■ 89
SSBP4-201ENST00000270061 SMIM28A0A1B0GU29 152 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 KLRC2P26717 231 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 DSG1Q02413 1049 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 USP41Q3LFD5 358 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 SYCE2Q6PIF2 218 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 HASPINQ8TF76 798 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 NT5C1BQ96P26 610 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 LACRTQ9GZZ8 138 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 CHST7Q9NS84 486 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 MTCL1Q9Y4B5 1905 aaKnown RBP26.28■■□□□ 1.8
SSBP4-201ENST00000270061 VWA8A3KMH1 1905 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 FOXN3O00409 490 aaPredicted RBP26.28■■□□□ 1.8
SSBP4-201ENST00000270061 RIOK3O14730 519 aaKnown RBP26.28■■□□□ 1.8
SSBP4-201ENST00000270061 KIF4AO95239 1232 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms