RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 KBTBD7Q8WVZ9 684 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 CD101Q93033 1021 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 PGBD4Q96DM1 585 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
TPM1-201ENST00000267996 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
TPM1-201ENST00000267996 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
TPM1-201ENST00000267996 UBN1Q9NPG3 1134 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 RGS18Q9NS28 235 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 BRCA2P51587 3418 aa17.37■□□□□ 0.37
TPM1-201ENST00000267996 MIF4GDA9UHW6 222 aaKnown RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 SELPP16109 830 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 COMTP21964 271 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 RPL9P32969 192 aaKnown RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 PAFAH1B1P43034 410 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 FAM189BP81408 668 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 LLGL2Q6P1M3 1020 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 RTN4RL1Q86UN2 441 aaPredicted RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 TOP6BLQ8N6T0 577 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 GPR161Q8N6U8 529 aaKnown RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 NOA1Q8NC60 698 aaKnown RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 MS4A14Q96JA4 679 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 RNF208Q9H0X6 261 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 RSAD1Q9HA92 442 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 PARVAQ9NVD7 372 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 CYTH4Q9UIA0 394 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 SCINQ9Y6U3 715 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 C9IYK1 514 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 FGFR1P11362 822 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 GPD2P43304 727 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 SCNN1GP51170 649 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 DNA2P51530 1060 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 BFSP2Q13515 415 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 PTPROQ16827 1216 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 FAM43BQ6ZT52 329 aaPredicted RBP17.36■□□□□ 0.37
TPM1-201ENST00000267996 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 ERICH1Q86X53 443 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 CRYBG2Q8N1P7 616 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 RASGEF1CQ8N431 466 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 SPATA4Q8NEY3 305 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 ACTRT1Q8TDG2 376 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 BTBD6Q96KE9 485 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 ANAPC7Q9UJX3 599 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
TPM1-201ENST00000267996 WARSP23381 471 aaKnown RBP17.35■□□□□ 0.37
TPM1-201ENST00000267996 CTNNA2P26232 953 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 GSCP56915 257 aaPredicted RBP17.35■□□□□ 0.37
TPM1-201ENST00000267996 PTPN20Q4JDL3 420 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 CCDC181Q5TID7 509 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 ARHGAP17Q68EM7 881 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 LINC01599Q8WXQ3 324 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 TRIM7Q9C029 511 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 CARD9Q9H257 536 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 EHD2Q9NZN4 543 aa17.35■□□□□ 0.37
TPM1-201ENST00000267996 TTC7AQ9ULT0 858 aaPredicted RBP17.35■□□□□ 0.37
TPM1-201ENST00000267996 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 TMEM110-MUSTN1A8MSY1 372 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 HUS1O60921 280 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 PROSCO94903 275 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 EOMESO95936 686 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 MNX1P50219 401 aaPredicted RBP17.34■□□□□ 0.37
TPM1-201ENST00000267996 PEX5P50542 639 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 GPNMBQ14956 572 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 PKDCCQ504Y2 493 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 PHLDB2Q86SQ0 1253 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 ACOT1Q86TX2 421 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 APPL2Q8NEU8 664 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 OR6B3Q8NGW1 331 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 FEZF2Q8TBJ5 459 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 FTHL17Q9BXU8 183 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 SMARCAL1Q9NZC9 954 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 STRIP2Q9ULQ0 834 aa17.34■□□□□ 0.37
TPM1-201ENST00000267996 TMEM191CA6NGB0 347 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 MYO1FO00160 1098 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 PODXLO00592 558 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 MYCP01106 439 aaPredicted RBP17.33■□□□□ 0.37
TPM1-201ENST00000267996 IGFBP6P24592 240 aaPredicted RBP17.33■□□□□ 0.37
TPM1-201ENST00000267996 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.37
TPM1-201ENST00000267996 GNL1P36915 607 aaPredicted RBP17.33■□□□□ 0.37
TPM1-201ENST00000267996 SLC1A1P43005 524 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 GABRB2P47870 512 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.37
TPM1-201ENST00000267996 TAP1Q03518 808 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 GRIK3Q13003 919 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 DCAF12L1Q5VU92 463 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 CPNE8Q86YQ8 564 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 PDCL2Q8N4E4 241 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 C12orf29Q8N999 325 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 MSANTD4Q8NCY6 345 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 C3orf20Q8ND61 904 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 ALG3Q92685 438 aa17.33■□□□□ 0.37
TPM1-201ENST00000267996 CPXM1Q96SM3 734 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms