RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 UPF2Q9HAU5 1272 aaKnown RBP15.35■□□□□ 0.05
COMMD4-201ENST00000267935 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
COMMD4-201ENST00000267935 SLC8A2Q9UPR5 921 aa15.35■□□□□ 0.05
COMMD4-201ENST00000267935 EXOC7Q9UPT5 735 aa15.35■□□□□ 0.05
COMMD4-201ENST00000267935 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-201ENST00000267935 PCDHB5Q9Y5E4 795 aa15.35■□□□□ 0.05
COMMD4-201ENST00000267935 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
COMMD4-201ENST00000267935 KPNA7A9QM74 516 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 K7ESF4 209 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 IL18RAPO95256 599 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 NFICP08651 508 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 HAPLN1P10915 354 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 NFE2Q16621 373 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 PRR23CQ6ZRP0 262 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 WDR5BQ86VZ2 330 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 OR10T2Q8NGX3 314 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 LARP4BQ92615 738 aaKnown RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 MRPS31Q92665 395 aaKnown RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 HVCN1Q96D96 273 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 LOXL4Q96JB6 756 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 TMX3Q96JJ7 454 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 ZNF560Q96MR9 790 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 LRRC3BQ96PB8 259 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 MKNK1Q9BUB5 465 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 SLC46A2Q9BY10 475 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 ST6GALNAC4Q9H4F1 302 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 R3HCC1Q9Y3T6 440 aaKnown RBP15.34■□□□□ 0.05
COMMD4-201ENST00000267935 TICRRQ7Z2Z1 1910 aa15.34■□□□□ 0.05
COMMD4-201ENST00000267935 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.05
COMMD4-201ENST00000267935 FRYLO94915 3013 aa15.33■□□□□ 0.05
COMMD4-201ENST00000267935 CCDC163A0A0D9SF12 145 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CSH1P0DML2 217 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CSH2P0DML3 217 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 PLCG1P19174 1290 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
COMMD4-201ENST00000267935 RPL10AP62906 217 aaKnown RBP15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CYP4F8P98187 520 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 RUNX3Q13761 415 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CCINQ13939 588 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 WSCD1Q658N2 575 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 IL31Q6EBC2 164 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 TXNDC11Q6PKC3 985 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CACNA2D4Q7Z3S7 1137 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 TMEM130Q8N3G9 435 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 TTC9BQ8N6N2 239 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CNTNAP3BQ96NU0 1288 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CNTNAP3Q9BZ76 1288 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 CCSER1Q9C0I3 900 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 KIF9Q9HAQ2 790 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 TDP1Q9NUW8 608 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 UXTQ9UBK9 157 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-201ENST00000267935 STYXL1Q9Y6J8 313 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 NCANO14594 1321 aa15.33■□□□□ 0.04
COMMD4-201ENST00000267935 ANKRD63C9JTQ0 380 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 HUS1O60921 280 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
COMMD4-201ENST00000267935 ADRB1P08588 477 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 TNK2Q07912 1038 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 DMWDQ09019 674 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
COMMD4-201ENST00000267935 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-201ENST00000267935 PPM1JQ5JR12 505 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 SLC39A4Q6P5W5 647 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 Q6ZS52 159 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 FAM160A2Q8N612 972 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-201ENST00000267935 MAB21L3Q8N8X9 362 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 IL21Q9HBE4 155 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 SEL1LQ9UBV2 794 aa15.32■□□□□ 0.04
COMMD4-201ENST00000267935 RALGAPA1Q6GYQ0 2036 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 TPRP12270 2363 aaKnown RBP15.31■□□□□ 0.04
COMMD4-201ENST00000267935 TRDMT1O14717 391 aaKnown RBP15.31■□□□□ 0.04
COMMD4-201ENST00000267935 AXIN1O15169 862 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 PRAMEF12O95522 483 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 GAP43P17677 238 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 ATF6P18850 670 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 DRD1P21728 446 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 TXLNAP40222 546 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 NLRP12P59046 1061 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 MYL7Q01449 175 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 NR1H3Q13133 447 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 SRSF5Q13243 272 aaKnown RBP15.31■□□□□ 0.04
COMMD4-201ENST00000267935 PDGFRLQ15198 375 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 AASDHQ4L235 1098 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-201ENST00000267935 LRRTM3Q86VH5 581 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 MON1AQ86VX9 555 aa15.31■□□□□ 0.04
COMMD4-201ENST00000267935 CAMKK1Q8N5S9 505 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms