RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 SLC47A2Q86VL8 602 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 KIAA1257Q9ULG3 409 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 PRG3Q9Y2Y8 225 aaPredicted RBP14.64□□□□□ -0.07
CDH3-201ENST00000264012 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
CDH3-201ENST00000264012 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 SERPINB9P50453 376 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 MYL6P60660 151 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 UGP2Q16851 508 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 ATP8B4Q8TF62 1192 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 ATG4AQ8WYN0 398 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 OPTNQ96CV9 577 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 MTMR9Q96QG7 549 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 NDFIP2Q9NV92 336 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 FAM8A1Q9UBU6 413 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 PEX19P40855 299 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 PTK7Q13308 1070 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 MGAT5BQ3V5L5 792 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 SH3RF1Q7Z6J0 888 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 PPIL6Q8IXY8 311 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 CERS5Q8N5B7 392 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 ZNF473Q8WTR7 871 aaKnown RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 TRIM15Q9C019 465 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 DRC3Q9H069 523 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 OLA1Q9NTK5 396 aaKnown RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 MOSPD1Q9UJG1 213 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 L3MBTL1Q9Y468 752 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 ZC3H4Q9UPT8 1303 aaKnown RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 A0A087WZ62 844 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 LAMTOR4Q0VGL1 99 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 IMPG1Q17R60 797 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 WDR49Q8IV35 697 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 MKL1Q969V6 931 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 FDXACB1Q9BRP7 624 aaPredicted RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 TRPC7Q9HCX4 862 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 TMEM120BA0PK00 339 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 SMIM24O75264 130 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 HSD17B3P37058 310 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 OAZ1P54368 228 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 WDR93Q6P2C0 686 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 SLC35C1Q96A29 364 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 FAM161BQ96MY7 647 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 GBA2Q9HCG7 927 aaPredicted RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.63□□□□□ -0.07
CDH3-201ENST00000264012 STOML1Q9UBI4 398 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 TSR3Q9UJK0 312 aaKnown RBP14.63□□□□□ -0.07
CDH3-201ENST00000264012 FRMPD4Q14CM0 1322 aa14.63□□□□□ -0.07
CDH3-201ENST00000264012 B3GAT3O94766 335 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 THPOP40225 353 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 FCGRTP55899 365 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 ANGPTL8Q6UXH0 198 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 MRIQ9BWK5 157 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 ZNF518BQ9C0D4 1074 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CYP4F11Q9HBI6 524 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CISHQ9NSE2 258 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 A0A0A6YYK5 440 aaPredicted RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 CXCL11O14625 94 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 LSP1P33241 339 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 ESRRGP62508 458 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 LY6KQ17RY6 165 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 PIP4K2CQ8TBX8 421 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 KLF6Q99612 283 aaPredicted RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 SUDS3Q9H7L9 328 aaPredicted RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 AIPL1Q9NZN9 384 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 H3BRB1 525 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 PPFIA2O75334 1257 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 STIP1P31948 543 aaKnown RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 RNF180Q86T96 592 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CNPY4Q8N129 248 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 PTPRN2Q92932 1015 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CCDC138Q96M89 665 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 FAM129AQ9BZQ8 928 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 TUT1Q9H6E5 874 aaKnown RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 CATSPERBQ9H7T0 1116 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 PCMTD2Q9NV79 361 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CFAP73A6NFT4 308 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 MEFVO15553 781 aaPredicted RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
CDH3-201ENST00000264012 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 KCNT1Q5JUK3 1230 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 SPIRE2Q8WWL2 714 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CPB2Q96IY4 423 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 TSSK1BQ9BXA7 367 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 THEGQ9P2T0 379 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 CAMTA1Q9Y6Y1 1673 aa14.62□□□□□ -0.07
CDH3-201ENST00000264012 ZBTB39O15060 712 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 CYP3A4P08684 503 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 SNRPAP09012 282 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 ACO1P21399 889 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 EPHB2P29323 1055 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 USP10Q14694 798 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 SNX17Q15036 470 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 FAM117BQ6P1L5 589 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 DNAAF5Q86Y56 855 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms