RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MYRIPQ8NFW9 859 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 DDX27Q96GQ7 796 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 PAWRQ96IZ0 340 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 PAAF1Q9BRP4 392 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 CNOT8Q9UFF9 292 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 CDC23Q9UJX2 597 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 ATP11BQ9Y2G3 1177 aa24.32■■□□□ 1.48
SMARCB1-201ENST00000263121 MMP8P22894 467 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 WARSP23381 471 aaKnown RBP24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 AARSP49588 968 aaKnown RBP eCLIP24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 MEI1Q5TIA1 1274 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 ADGRF2Q8IZF7 708 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 PDCL2Q8N4E4 241 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 OR6B3Q8NGW1 331 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 UROC1Q96N76 676 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 TLR10Q9BXR5 811 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 ADAM22Q9P0K1 906 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 UVRAGQ9P2Y5 699 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 CEP83Q9Y592 693 aa24.31■■□□□ 1.48
SMARCB1-201ENST00000263121 CYB561D2O14569 222 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 BUB1BO60566 1050 aaPredicted RBP24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 MICAL2O94851 1124 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 FTCDO95954 541 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 CAPN2P17655 700 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 CYP2C18P33260 490 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 SYCE1Q8N0S2 351 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 C11orf70Q9BRQ4 267 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 NUP85Q9BW27 656 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 CHORDC1Q9UHD1 332 aaPredicted RBP24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 SNX12Q9UMY4 172 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 SAR1BQ9Y6B6 198 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 A8MXQ7 604 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 RRM1P23921 792 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 GNL1P36915 607 aaPredicted RBP24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 STILQ15468 1287 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 LRRC26Q2I0M4 334 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 NOMO2Q5JPE7 1267 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 MMS22LQ6ZRQ5 1243 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 ACOT1Q86TX2 421 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 CRYBG2Q8N1P7 616 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 TET1Q8NFU7 2136 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 SENP8Q96LD8 212 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 SNX25Q9H3E2 840 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 GOLPH3Q9H4A6 298 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 ABCB6Q9NP58 842 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 STXBP5LQ9Y2K9 1186 aa24.3■■□□□ 1.48
SMARCB1-201ENST00000263121 NCK2O43639 380 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 PRLRP16471 622 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 LIN9Q5TKA1 542 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 LCLAT1Q6UWP7 414 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 OSTM1Q86WC4 334 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 ZNF564Q8TBZ8 553 aaPredicted RBP24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 URGCPQ8TCY9 931 aa24.29■■□□□ 1.48
SMARCB1-201ENST00000263121 HCRTO43612 131 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 CLTBP09497 229 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 PAX3P23760 479 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 LMO2P25791 158 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 DSC1Q08554 894 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 C2CD6Q53TS8 623 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 C11orf63Q6NUN7 778 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 CD300LGQ6UXG3 332 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 DAAM2Q86T65 1068 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 C12orf29Q8N999 325 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 RABGGTAQ92696 567 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 DPEP3Q9H4B8 488 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 TMEM39AQ9NV64 488 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 CYTH4Q9UIA0 394 aa24.28■■□□□ 1.48
SMARCB1-201ENST00000263121 GABRDO14764 452 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 SLU7O95391 586 aaKnown RBP24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 CALB1P05937 261 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 WSCD1Q658N2 575 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 ARHGAP17Q68EM7 881 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 CRIPAKQ8N1N5 446 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 KANSL3Q9P2N6 904 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 TSPAN16Q9UKR8 245 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 HYOU1Q9Y4L1 999 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 PCDHB7Q9Y5E2 793 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 M0QYV0 167 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 GPD2P43304 727 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 WHAMMP3Q1A5X7 153 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 TIGD5Q53EQ6 642 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 PPP1R26Q5T8A7 1209 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 PLEKHA7Q6IQ23 1121 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 NT5DC3Q86UY8 548 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 TMEM86AQ8N2M4 240 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 TMEM106CQ9BVX2 250 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 TBC1D13Q9NVG8 400 aa24.27■■□□□ 1.48
SMARCB1-201ENST00000263121 B4GALT3O60512 393 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 B3GAT3O94766 335 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 DDHD2O94830 711 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 PDGFRBP09619 1106 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 GTF2F1P35269 517 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 LLGL2Q6P1M3 1020 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 DCLRE1AQ6PJP8 1040 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 DSTYKQ6XUX3 929 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 PEX26Q7Z412 305 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 NECAB2Q7Z6G3 386 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 ERICH1Q86X53 443 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 ZNF280BQ86YH2 543 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms