RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PRIM2P49643 509 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 HIST2H2ACQ16777 129 aaPredicted RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 HIST2H2AA3Q6FI13 130 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 TUFT1Q9NNX1 390 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 IMPAD1Q9NX62 359 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 CRLS1Q9UJA2 301 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 NCF1BA6NI72 391 aaPredicted RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 NCF1CA8MVU1 366 aaPredicted RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 B2RBV5 119 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 TSC22D2O75157 780 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 NCF1P14598 390 aaPredicted RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 LAMB3Q13751 1172 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 C10orf120Q5SQS8 335 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 POTEAQ6S8J7 498 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 RIC8BQ9NVN3 520 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 IGSF1Q8N6C5 1336 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 ITGA4P13612 1032 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 AKR1B1P15121 316 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 DDX39BQ13838 428 aaKnown RBP14.89□□□□□ -0.03
CUX2-201ENST00000261726 PHKG1Q16816 387 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 OTOAQ7RTW8 1153 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 SGF29Q96ES7 293 aa14.89□□□□□ -0.03
CUX2-201ENST00000261726 KLHL2O95198 593 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 PYGMP11217 842 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 TMED10P49755 219 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 USP11P51784 963 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 PIGHQ14442 188 aaPredicted RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 VPS37AQ8NEZ2 397 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 KRT84Q9NSB2 600 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 SMARCAL1Q9NZC9 954 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 KIF28PB7ZC32 967 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 CFAP99D6REC4 459 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 SERPINB3P29508 390 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 PBLDP30039 288 aaPredicted RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 CYP2C19P33261 490 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 AASDHQ4L235 1098 aaPredicted RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 MROH9Q5TGP6 573 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 SCFD2Q8WU76 684 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 METTL5Q9NRN9 209 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 FAM47DPA6NHR8 397 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 THUMPD3Q9BV44 507 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 H7C1W4 665 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 TPST1O60507 370 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 RPS6KA5O75582 802 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 USP1O94782 785 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 ATP6V1B1P15313 513 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 BYSLQ13895 437 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 CYP4A22Q5TCH4 519 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 TSEN34Q9BSV6 310 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 ALBP02768 609 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 KLC1Q07866 573 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 USP39Q53GS9 565 aaKnown RBP14.88□□□□□ -0.03
CUX2-201ENST00000261726 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 CALML6Q8TD86 181 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 WDR24Q96S15 920 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 CAAP1Q9H8G2 361 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 TULP4Q9NRJ4 1543 aa14.88□□□□□ -0.03
CUX2-201ENST00000261726 GALCP54803 685 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 WLSQ5T9L3 541 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 ACSF2Q96CM8 615 aaPredicted RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 TUBGCP3Q96CW5 907 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 CINPQ9BW66 212 aaPredicted RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 NAGPAQ9UK23 515 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 RPS6KA4O75676 772 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 FYNP06241 537 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 NCAM1P13591 858 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 RAB14P61106 215 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 ORC2Q13416 577 aaPredicted RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 KCNV1Q6PIU1 500 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 KRT77Q7Z794 578 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 AGGF1Q8N302 714 aaeCLIP14.87□□□□□ -0.03
CUX2-201ENST00000261726 FLCNQ8NFG4 579 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 RBBP8Q99708 897 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SLC25A13Q9UJS0 675 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 FHOD1Q9Y613 1164 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 ITIH2P19823 946 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 ALDH1A3P47895 512 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SNRNP35Q16560 246 aaKnown RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 GALNTL6Q49A17 601 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 TRIM65Q6PJ69 517 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SHC4Q6S5L8 630 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 NDEL1Q9GZM8 345 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 H2AFYO75367 372 aaKnown RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 NCKAP1LP55160 1127 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 NME5P56597 212 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SGSM1Q2NKQ1 1148 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 KRT35Q92764 455 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 NMRK2Q9NPI5 230 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 ARHGEF3Q9NR81 526 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SNX12Q9UMY4 172 aa14.87□□□□□ -0.03
CUX2-201ENST00000261726 SLC16A3O15427 465 aaKnown RBP14.87□□□□□ -0.03
CUX2-201ENST00000261726 GUCY1A2P33402 732 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms