RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 MOV10L1Q9BXT6 1211 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 APOBEC3GQ9HC16 384 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 GBA2Q9HCG7 927 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 TXNRD2Q9NNW7 524 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 NR3C2P08235 984 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 CCND1P24385 295 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 CENPCQ03188 943 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 TAF11Q15544 211 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 BBOF1Q8ND07 529 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 DONSONQ9NYP3 566 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 K7ERI5 159 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 CUL2Q13617 745 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 EFTUD2Q15029 972 aaKnown RBP eCLIP15.26■□□□□ 0.032e-10■■□□□ 12.8
SFSWAP-201ENST00000261674 BBS9Q3SYG4 887 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF568Q3ZCX4 644 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 LVRNQ6Q4G3 990 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 RPAINQ86UA6 219 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 OR5B17Q8NGF7 314 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 SLCO2A1Q92959 643 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 TRIM11Q96F44 468 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ARHGEF3Q9NR81 526 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKEF1Q9NU02 776 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 A0A0G2JND7 137 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ATP2A1O14983 1001 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 MAPK13O15264 365 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 UNC5CO95185 931 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 BRD2P25440 801 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 OSTNP61366 133 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 PRKCEQ02156 737 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 KLF1Q13351 362 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 RIPK1Q13546 671 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 CRELD2Q6UXH1 353 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 MON1BQ7L1V2 547 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 TRABD2AQ86V40 505 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ABRAQ8N0Z2 381 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 LPAR1Q92633 364 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 SPDL1Q96EA4 605 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 AVENQ9NQS1 362 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 CHKBQ9Y259 395 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 NUB1Q9Y5A7 615 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 WEE2P0C1S8 567 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 CD19P15391 556 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 EPHB2P29323 1055 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 GTF2H1P32780 548 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 NOMO3P69849 1222 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 CCDC60Q8IWA6 550 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 CCHCR1Q8TD31 782 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 MAML1Q92585 1016 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ATP6V0A1Q93050 837 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 SENP7Q9BQF6 1050 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 ST6GALNAC4Q9H4F1 302 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 XPNPEP1Q9NQW7 623 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 PCSK1NQ9UHG2 260 aa15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
SFSWAP-201ENST00000261674 TJP3O95049 919 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 NRLP54845 237 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZBTB16Q05516 673 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 DNAJC24Q6P3W2 148 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ENOSF1Q7L5Y1 443 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 LONP2Q86WA8 852 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKLE1Q8NAG6 615 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PYROXD1Q8WU10 500 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF606Q8WXB4 792 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF570Q96NI8 536 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZIC5Q96T25 663 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 IMPG2Q9BZV3 1241 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 EBF2Q9HAK2 575 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 TXLNGQ9NUQ3 528 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 NKX1-2Q9UD57 310 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PRKAG3Q9UGI9 489 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 FBXO40Q9UH90 709 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 HTTP42858 3142 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 PSME4Q14997 1843 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 MYBL1P10243 752 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 SFNP31947 248 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZNF157P51786 506 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZACNQ401N2 412 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKRD20A2Q5SQ80 823 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKRD20A1Q5TYW2 823 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ANKRD20A3Q5VUR7 823 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 CATSPERGQ6ZRH7 1159 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 RHPN2Q8IUC4 686 aa15.24■□□□□ 0.03
SFSWAP-201ENST00000261674 ZCCHC9Q8N567 271 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms