RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ZNF197O14709 1029 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 GADD45BO75293 160 aaPredicted RBP24.63■■□□□ 1.53
LSM4-201ENST00000252816 MYL4P12829 197 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 DLG4P78352 724 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 MYL7Q01449 175 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 TSPY1Q01534 308 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 SMARCB1Q12824 385 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 NFIL3Q16649 462 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 CCDC142Q17RM4 750 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 MGAT5BQ3V5L5 792 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 TDRD10Q5VZ19 366 aaKnown RBP24.63■■□□□ 1.53
LSM4-201ENST00000252816 CEP135Q66GS9 1140 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 TMC8Q8IU68 726 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 FBXL6Q8N531 539 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 C2orf15Q8WU43 125 aaKnown RBP24.63■■□□□ 1.53
LSM4-201ENST00000252816 TIGD1Q96MW7 591 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 PKMYT1Q99640 499 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 ABI2Q9NYB9 513 aaPredicted RBP24.63■■□□□ 1.53
LSM4-201ENST00000252816 HCN4Q9Y3Q4 1203 aa24.63■■□□□ 1.53
LSM4-201ENST00000252816 MICAL2O94851 1124 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 HAPLN1P10915 354 aaPredicted RBP24.62■■□□□ 1.53
LSM4-201ENST00000252816 GJA1P17302 382 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 ATF6P18850 670 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 LHX1P48742 406 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 TUFMP49411 452 aaKnown RBP24.62■■□□□ 1.53
LSM4-201ENST00000252816 MYL6P60660 151 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 ZCWPW2Q504Y3 356 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 INTS6LQ5JSJ4 861 aaKnown RBP24.62■■□□□ 1.53
LSM4-201ENST00000252816 MTSS1LQ765P7 747 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 DPH6Q7L8W6 267 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 DNAJB7Q7Z6W7 309 aaPredicted RBP24.62■■□□□ 1.53
LSM4-201ENST00000252816 LEMD2Q8NC56 503 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 SPATA20Q8TB22 786 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 SPPL2BQ8TCT7 592 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 LPIN3Q9BQK8 851 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 XYLT2Q9H1B5 865 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 PCDHA5Q9Y5H7 936 aa24.62■■□□□ 1.53
LSM4-201ENST00000252816 C4BPAP04003 597 aaKnown RBP24.61■■□□□ 1.53
LSM4-201ENST00000252816 SRFP11831 508 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 NR2F2P24468 414 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 LMO2P25791 158 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 TRPC3Q13507 836 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 C1orf220Q5T0J3 134 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 SHKBP1Q8TBC3 707 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 TMC2Q8TDI7 906 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 PSMG2Q969U7 264 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 ZSWIM3Q96MP5 696 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 GSDMAQ96QA5 445 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 MMS19Q96T76 1030 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 KXD1Q9BQD3 176 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 ZNF334Q9HCZ1 680 aaPredicted RBP24.61■■□□□ 1.53
LSM4-201ENST00000252816 RMND1Q9NWS8 449 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 GTF3C4Q9UKN8 822 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 FRMD4BQ9Y2L6 1034 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 ASB3Q9Y575 518 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 PCDHB5Q9Y5E4 795 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 WDFY4Q6ZS81 3184 aa24.61■■□□□ 1.53
LSM4-201ENST00000252816 PHACTR2O75167 634 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 AKAP3O75969 853 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 CFHP08603 1231 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 AP3M2P53677 418 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 VCPP55072 806 aaKnown RBP24.6■■□□□ 1.53
LSM4-201ENST00000252816 BIRC3Q13489 604 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 NFE2Q16621 373 aaPredicted RBP24.6■■□□□ 1.53
LSM4-201ENST00000252816 WDR72Q3MJ13 1102 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 SUGP1Q8IWZ8 645 aaKnown RBP24.6■■□□□ 1.53
LSM4-201ENST00000252816 MRPL45Q9BRJ2 306 aaKnown RBP24.6■■□□□ 1.53
LSM4-201ENST00000252816 PI4K2AQ9BTU6 479 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 NME7Q9Y5B8 376 aa24.6■■□□□ 1.53
LSM4-201ENST00000252816 MYBPHLA2RUH7 354 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 ATP2C2O75185 946 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 SMC2O95347 1197 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 VNN1O95497 513 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 STAU1O95793 577 aaKnown RBP24.59■■□□□ 1.53
LSM4-201ENST00000252816 WARSP23381 471 aaKnown RBP24.59■■□□□ 1.53
LSM4-201ENST00000252816 PCSK1P29120 753 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 PRCPP42785 496 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 TEAD2Q15562 447 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 FAM78AQ5JUQ0 283 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 ZNF658Q5TYW1 1059 aaPredicted RBP24.59■■□□□ 1.53
LSM4-201ENST00000252816 TANGO2Q6ICL3 276 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 GIPC2Q8TF65 315 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 SMARCE1Q969G3 411 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 ELMO3Q96BJ8 720 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 CHMP5Q9NZZ3 219 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 FBXL21Q9UKT6 434 aa24.59■■□□□ 1.53
LSM4-201ENST00000252816 A0A1W2PRU2 124 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 MAPK13O15264 365 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 FCARP24071 287 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 ATICP31939 592 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 GPR15P49685 360 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 PSMC1P62191 440 aaKnown RBP24.58■■□□□ 1.53
LSM4-201ENST00000252816 GPC5P78333 572 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 NCOA4Q13772 614 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 FAM171BQ6P995 826 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 GAREM2Q75VX8 874 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 ITIH5Q86UX2 942 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 FAM200AQ8TCP9 573 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 GPR152Q8TDT2 470 aa24.58■■□□□ 1.53
LSM4-201ENST00000252816 SYAP1Q96A49 352 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms