RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CCDC66A2RUB6 948 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 H3BQF6 201 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 PPEF2O14830 753 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 MGEA5O60502 916 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 CCL5P13501 91 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 MMP8P22894 467 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 POLR2BP30876 1174 aaKnown RBP24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 TNNT3P45378 269 aaPredicted RBP24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 ALKAL1Q6UXT8 129 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 DNAJC5GQ8N7S2 189 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 WHAMMQ8TF30 809 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 UBE2Q2Q8WVN8 375 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 AMACRQ9UHK6 382 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 LPIN1Q14693 890 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 TRAF7Q6Q0C0 670 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 C1orf131Q8NDD1 294 aaKnown RBP24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 FAXDC2Q96IV6 333 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 RNF208Q9H0X6 261 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 PCDHGC3Q9UN70 934 aa24.79■■□□□ 1.56
SYNGR3-201ENST00000248121 A0A0U1RQG5 324 aaPredicted RBP24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 KBTBD13C9JR72 458 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 RAD23BP54727 409 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 PTPN11Q06124 597 aaPredicted RBP24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 LIN9Q5TKA1 542 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 SMYD5Q6GMV2 418 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 TWNKQ96RR1 684 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 SLITRK6Q9H5Y7 841 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 PARP2Q9UGN5 583 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 HMGXB4Q9UGU5 601 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 PADI3Q9ULW8 664 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 HPCAL4Q9UM19 191 aa24.78■■□□□ 1.56
SYNGR3-201ENST00000248121 GJB6O95452 261 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 LSM8O95777 96 aaKnown RBP24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 ATICP31939 592 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 CDH5P33151 784 aaPredicted RBP24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 VIPAS39Q9H9C1 493 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 DPP3Q9NY33 737 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 CNTN3Q9P232 1028 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 NFU1Q9UMS0 254 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 AGAP1Q9UPQ3 857 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 TCRBV5S1A1TA0A578 114 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 MYO1FO00160 1098 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 CKBP12277 381 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 EPHB4P54760 987 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 YWHAEP62258 255 aaKnown RBP24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 MBTPS1Q14703 1052 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 DAB2IPQ5VWQ8 1189 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 SND1Q7KZF4 910 aaKnown RBP eCLIP24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 HPDLQ96IR7 371 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 NAP1L3Q99457 506 aaPredicted RBP24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 ITGA11Q9UKX5 1188 aa24.77■■□□□ 1.56
SYNGR3-201ENST00000248121 ARVCFO00192 962 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 YARSP54577 528 aaKnown RBP24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 ORC1Q13415 861 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 ZBTB6Q15916 424 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 PPP1R2P3Q6NXS1 205 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 APBB1IPQ7Z5R6 666 aaPredicted RBP24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 IFT81Q8WYA0 676 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 LPPQ93052 612 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 DNM1LO00429 736 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 PROSCO94903 275 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 OAS2P29728 719 aaKnown RBP24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 AFF1P51825 1210 aaKnown RBP24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 NT5DC4Q86YG4 428 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 SLC4A11Q8NBS3 891 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 ZFP42Q96MM3 310 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 ELOVL4Q9GZR5 314 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 PLEKHA5Q9HAU0 1116 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 GOLGA2P5Q9HBQ8 144 aa24.76■■□□□ 1.55
SYNGR3-201ENST00000248121 TCRBV7S2A1N4TA0A589 114 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 TTI1O43156 1089 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 CILPO75339 1184 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 FAM153BP0C7A2 387 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 RWDD2BP57060 319 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 FAM153CQ494X1 144 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 DENND1BQ6P3S1 775 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 EMBQ6PCB8 327 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 CD302Q8IX05 232 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 TMEM35BQ8NCS4 154 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 CAVIN3Q969G5 261 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 MRPL47Q9HD33 250 aaKnown RBP24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 FAM105AQ9NUU6 356 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 FAM153AQ9UHL3 310 aa24.75■■□□□ 1.55
SYNGR3-201ENST00000248121 IBSPP21815 317 aaPredicted RBP24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 ECHS1P30084 290 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 SLC1A1P43005 524 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 SOX4Q06945 474 aaPredicted RBP24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 FAM26DQ5JW98 314 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 SEL1L2Q5TEA6 688 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 PRELID2Q8N945 189 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 ZNF518BQ9C0D4 1074 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 CYTH4Q9UIA0 394 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 SMIM28A0A1B0GU29 152 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 O00370 1275 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 STAU1O95793 577 aaKnown RBP24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 PAEPP09466 180 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 RPL7AP62424 266 aaKnown RBP24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 RBP5P82980 135 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 PAK2Q13177 524 aa24.74■■□□□ 1.55
SYNGR3-201ENST00000248121 CLUL1Q15846 466 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms