RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TAP1Q03518 808 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 INCA1Q0VD86 236 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 APBB1IPQ7Z5R6 666 aaPredicted RBP19.58■□□□□ 0.72
HOXC11-201ENST00000243082 CCDC105Q8IYK2 499 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 TMEM40Q8WWA1 233 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 C1orf54Q8WWF1 131 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 ZFYVE28Q9HCC9 887 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 GRHL1Q9NZI5 618 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 HES2Q9Y543 173 aa19.58■□□□□ 0.72
HOXC11-201ENST00000243082 FAM155AB1AL88 458 aaPredicted RBP19.57■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA8KD6RF30 607 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 F8VP50 259 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 TNPO2O14787 897 aaKnown RBP19.57■□□□□ 0.72
HOXC11-201ENST00000243082 TCF4P15884 667 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 KLF1Q13351 362 aaPredicted RBP19.57■□□□□ 0.72
HOXC11-201ENST00000243082 ZBTB6Q15916 424 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 SGO2Q562F6 1265 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 DCUN1D2Q6PH85 259 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 ZDHHC24Q6UX98 284 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 TMC3Q7Z5M5 1100 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 ANKS1BQ7Z6G8 1248 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 EXD1Q8NHP7 514 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 MAIP1Q8WWC4 291 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 ARL8AQ96BM9 186 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 STRIP2Q9ULQ0 834 aa19.57■□□□□ 0.72
HOXC11-201ENST00000243082 BARX2Q9UMQ3 279 aaPredicted RBP19.57■□□□□ 0.72
HOXC11-201ENST00000243082 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.57■□□□□ 0.72
HOXC11-201ENST00000243082 MICAL2O94851 1124 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 KRT14P02533 472 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 RALAP11233 206 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 SSR1P43307 286 aaKnown RBP19.56■□□□□ 0.72
HOXC11-201ENST00000243082 RPL21P46778 160 aaKnown RBP19.56■□□□□ 0.72
HOXC11-201ENST00000243082 CRHR2Q13324 411 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 SNX17Q15036 470 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 TTMPQ5BVD1 217 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 ZNF771Q7L3S4 317 aaPredicted RBP19.56■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA6L1Q8N7Z2 621 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 SLCO2A1Q92959 643 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 CPXM1Q96SM3 734 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 FMO2Q99518 471 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 CHST7Q9NS84 486 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 LCMT1Q9UIC8 334 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 PLAAQ9Y263 795 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 TRIP11Q15643 1979 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 VDRP11473 427 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 NDST1P52848 882 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 CNGA2Q16280 664 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 CCDC50Q8IVM0 306 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 NIPA2Q8N8Q9 360 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 HEMGNQ9BXL5 484 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 TXLNGYQ9BZA5 131 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 FAM124BQ9H5Z6 455 aaPredicted RBP19.56■□□□□ 0.72
HOXC11-201ENST00000243082 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
HOXC11-201ENST00000243082 TRIP12Q14669 1992 aaPredicted RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 H0YGN5 161 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 PPEF2O14830 753 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 AXLP30530 894 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 HOXC8P31273 242 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 GJC1P36383 396 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 GSCP56915 257 aaPredicted RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 PURAQ00577 322 aaKnown RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 PIGHQ14442 188 aaPredicted RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 FSCN1Q16658 493 aaKnown RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 ATG4AQ8WYN0 398 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 HEXIM2Q96MH2 286 aaKnown RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 DCLK3Q9C098 648 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 NXF3Q9H4D5 531 aaKnown RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 R3HDM2Q9Y2K5 976 aaKnown RBP19.55■□□□□ 0.72
HOXC11-201ENST00000243082 NFS1Q9Y697 457 aa19.55■□□□□ 0.72
HOXC11-201ENST00000243082 C17orf102A2RUQ5 167 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA6CA6NDK9 693 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 HMGCRP04035 888 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA6DP0CG33 693 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 RFC1P35251 1148 aaPredicted RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 GPD2P43304 727 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 YARSP54577 528 aaKnown RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 PLTPP55058 493 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 DHX9Q08211 1270 aaKnown RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 MYO1EQ12965 1108 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 LRRC38Q5VT99 294 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 FBXO25Q8TCJ0 367 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 KATNAL1Q9BW62 490 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 OSBPL8Q9BZF1 889 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA6AQ9NYA3 693 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 CNTN3Q9P232 1028 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 TUBGCP4Q9UGJ1 667 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 RALGAPA2Q2PPJ7 1873 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 PPFIA2O75334 1257 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 ECEL1O95672 775 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 ERBB2P04626 1255 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 KRT3P12035 628 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 PSMC1P62191 440 aaKnown RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 SNX1Q13596 522 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 LRIG3Q6UXM1 1119 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 XYLT1Q86Y38 959 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms