RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NECTIN4Q96NY8 510 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CLSTN3Q9BQT9 956 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 DNAI2Q9GZS0 605 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 PPEF2O14830 753 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 SPTLC1O15269 473 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TGM5O43548 720 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 C4BPAP04003 597 aaKnown RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 CPB1P15086 417 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 EPCAMP16422 314 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 BMP6P22004 513 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 PCSK1P29120 753 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 PMS1P54277 932 aaKnown RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TSPY1Q01534 308 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TCF15Q12870 199 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 NCOA4Q13772 614 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 SKOR2Q2VWA4 1001 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ZACNQ401N2 412 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 KRT39Q6A163 491 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 DCP1BQ8IZD4 617 aaKnown RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 MMS19Q96T76 1030 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ADAM7Q9H2U9 754 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TMEM8AQ9HCN3 771 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 MAN1C1Q9NR34 630 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ANO10Q9NW15 660 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 SIX4Q9UIU6 781 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 FBXL5Q9UKA1 691 aa12.1□□□□□ -0.47
SF3B6-201ENST00000233468 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
SF3B6-201ENST00000233468 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 TBC1D4O60343 1298 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 XYLBO75191 536 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 HNRNPA1P09651 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 PIK3CAP42336 1068 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 MTHFRP42898 656 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 MXI1P50539 228 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 ARPP19P56211 112 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 STX17P56962 302 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 WDR72Q3MJ13 1102 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 ZNF667Q5HYK9 610 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 TDRD10Q5VZ19 366 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 C15orf39Q6ZRI6 1047 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 RBM43Q6ZSC3 357 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 SV2AQ7L0J3 742 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 FAM114A1Q8IWE2 563 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 FBXL6Q8N531 539 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 C2orf15Q8WU43 125 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 RHOBTB2Q9BYZ6 727 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 SMOC2Q9H3U7 446 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
SF3B6-201ENST00000233468 FBXW11Q9UKB1 542 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 CACNA1HO95180 2353 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
SF3B6-201ENST00000233468 PLXNA3P51805 1871 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 PRRG1O14668 218 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 TACC1O75410 805 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ABLIM3O94929 683 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ATF2P15336 505 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 HOXA9P31269 272 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 GCLMP48507 274 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 DLG4P78352 724 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ROR1Q01973 937 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 SIGLEC14Q08ET2 396 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 GPR17Q13304 367 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 PLD1Q13393 1074 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 NFE2Q16621 373 aaPredicted RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms