RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 C1orf21Q9H246 121 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ALG6Q9Y672 507 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 GSG1L2A8MUP6 293 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ABHD2P08910 425 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 MARCKSL1P49006 195 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 MXI1P50539 228 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 CAV1Q03135 178 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 OGFOD2Q6N063 350 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 UBL4BQ8N7F7 174 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 POU5F2Q8N7G0 328 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 TMIGD2Q96BF3 282 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 MCF2LO15068 1137 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 STAMBPO95630 424 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 CRTAMO95727 393 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 FAM58BPP0C7Q3 252 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 KRT17Q04695 432 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 GK3PQ14409 553 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ITPRIPL1Q6GPH6 555 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SLC26A7Q8TE54 656 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 DCUN1D1Q96GG9 259 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 PWWP2AQ96N64 755 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 LOC105371267A0A1B0GV96 52 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 PCYT1AP49585 367 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 JAM2P57087 298 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 SF3B4Q15427 424 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSH2-201ENST00000233146 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ARHGEF26Q96DR7 871 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 CCDC68Q9H2F9 335 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 TAGLN3Q9UI15 199 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ERVK-11Q9UQG0 969 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 IVNS1ABPQ9Y6Y0 642 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
MSH2-201ENST00000233146 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
MSH2-201ENST00000233146 C5P01031 1676 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 INHBBP09529 407 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 PRDX6P30041 224 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
MSH2-201ENST00000233146 TROAPQ12815 778 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 ATP1A4Q13733 1029 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
MSH2-201ENST00000233146 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 COG5Q9UP83 839 aa13.65□□□□□ -0.22
MSH2-201ENST00000233146 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 KRT15P19012 456 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 ADRA1DP25100 572 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CIITAP33076 1130 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 SERPINB6P35237 376 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 SEL1L2Q5TEA6 688 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 JADE3Q92613 823 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 C9orf72Q96LT7 481 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CNBD2Q96M20 576 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 SSU72Q9NP77 194 aaKnown RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 ASIC3Q9UHC3 531 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 AP4B1Q9Y6B7 739 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 DIP2CQ9Y2E4 1556 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 EXOC1LA0A1B0GW35 172 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 SORBS3O60504 671 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CCNT2O60583 730 aaKnown RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 CHRNB1P11230 501 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 UBL4AP11441 157 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CALML3P27482 149 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 EGFLAMQ63HQ2 1017 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 ALYREFQ86V81 257 aaKnown RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 ENAHQ8N8S7 591 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 OR7G1Q8NGA0 311 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 VPS11Q9H270 941 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CDH7Q9ULB5 785 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 RABGAP1Q9Y3P9 1069 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 ESRRBO95718 433 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 MYL2P10916 166 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms