RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 C4orf50Q6ZRC1 276 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 ZNF662Q6ZS27 426 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PDZD4Q76G19 769 aaPredicted RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 LRRC6Q86X45 466 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 CERS5Q8N5B7 392 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 EME2A4GXA9 379 aaPredicted RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PRKCBP05771 671 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 SERPINB3P29508 390 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PRAMEP78395 509 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 C1orf186Q6ZWK4 172 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 CD302Q8IX05 232 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 MCOLN2Q8IZK6 566 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PARD3BQ8TEW8 1205 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 HES6Q96HZ4 224 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 CEP41Q9BYV8 373 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 DCLK3Q9C098 648 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 TSR3Q9UJK0 312 aaKnown RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 MRPL42Q9Y6G3 142 aaKnown RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PROSCO94903 275 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 RPA3P35244 121 aaPredicted RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PRPSAP1Q14558 356 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 ZCCHC23Q6ZST2 131 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 RNF19AQ9NV58 838 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
NFKB1-201ENST00000226574 PCDHA3Q9Y5H8 950 aa14.4□□□□□ -0.1
NFKB1-201ENST00000226574 ZBBXA8MT70 800 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 A8MXQ7 604 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 RAP1GAPP47736 663 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 MED21Q13503 144 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 EML3Q32P44 896 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 TMA16Q96EY4 203 aaKnown RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 MOV10L1Q9BXT6 1211 aaKnown RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 UNKQ9C0B0 810 aaKnown RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 TRPV6Q9H1D0 765 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 KCNMB3Q9NPA1 279 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 AJAP1Q9UKB5 411 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 MYL6P60660 151 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 LAYNQ6UX15 382 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 DPP9Q86TI2 863 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 PRPF31Q8WWY3 499 aaKnown RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 PACSIN3Q9UKS6 424 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
NFKB1-201ENST00000226574 GNAT1P11488 350 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 ADRA2BP18089 450 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 CDH8P55286 799 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 RNF148Q8N7C7 305 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 FLAD1Q8NFF5 587 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 CYP26B1Q9NR63 512 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 FZD1Q9UP38 647 aa14.39□□□□□ -0.11
NFKB1-201ENST00000226574 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 AQP5P55064 265 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 PIGHQ14442 188 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 PREPLQ4J6C6 727 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 TRIM67Q6ZTA4 783 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 ICA1LQ8NDH6 482 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 USP33Q8TEY7 942 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 COG5Q9UP83 839 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 MST1RQ04912 1400 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 P4HA2O15460 535 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 Q4G0T1 1027 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 FASTKD1Q53R41 847 aaKnown RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 SNX30Q5VWJ9 437 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 PPP1R2P3Q6NXS1 205 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 IFNEQ86WN2 208 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 GLIS2Q9BZE0 524 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 FHDC1Q9C0D6 1143 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 KIAA1683Q9H0B3 1180 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 COL5A2P05997 1499 aaPredicted RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 ADRB2P07550 413 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 CENPCQ03188 943 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 COBLL1Q53SF7 1204 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 SAMD7Q7Z3H4 446 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 CXorf38Q8TB03 319 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 ZNF606Q8WXB4 792 aa14.38□□□□□ -0.11
NFKB1-201ENST00000226574 DDX50Q9BQ39 737 aaKnown RBP14.38□□□□□ -0.11
NFKB1-201ENST00000226574 RNF103-CHMP3A0A140T963 221 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 SUPT3HO75486 399 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 VHLP40337 213 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 CCNG2Q16589 344 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 MIEF2Q96C03 454 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 PCDHB18PQ96TA0 734 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 SH3GL3Q99963 347 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 APOL2Q9BQE5 337 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 TMEM120AQ9BXJ8 343 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 UBXN6Q9BZV1 441 aa14.37□□□□□ -0.11
NFKB1-201ENST00000226574 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms