RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SYNJ2BP-COX16A0A087WUM0 186 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 C4BPAP04003 597 aaKnown RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 RASSF2P50749 326 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 LAMTOR4Q0VGL1 99 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 C1orf228Q6PIY5 440 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 SEC14L1Q92503 715 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 RAB3IPQ96QF0 476 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 FOXP3Q9BZS1 431 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 KDM4CQ9H3R0 1056 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 COX16Q9P0S2 106 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 TXNDC16Q9P2K2 825 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 NFASCO94856 1347 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 PMM2O15305 246 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 ZBED1O96006 694 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 CFHP08603 1231 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 RBP3P10745 1247 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 CDH8P55286 799 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 OTUD4Q01804 1114 aaKnown RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 EAPPQ56P03 285 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 DNERQ8NFT8 737 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 UBA3Q8TBC4 463 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 ACTL9Q8TC94 416 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 TTC17Q96AE7 1141 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 ZNF214Q9UL59 606 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 ITGB3P05106 788 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 UNGP13051 313 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 CREB1P16220 341 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 RGS7P49802 495 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 ITIH4Q14624 930 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 C3orf62Q6ZUJ4 267 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 LRRC37BQ96QE4 947 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 APOBEC3GQ9HC16 384 aaKnown RBP15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 GGA2Q9UJY4 613 aa15.74■□□□□ 0.11
UBE2D4-201ENST00000222402 I3L4J1 428 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 MCUR1Q96AQ8 359 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 FBXL18Q96ME1 805 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 TXLNGQ9NUQ3 528 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 ABCF3Q9NUQ8 709 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 MYPNQ86TC9 1320 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 A0A0G2JND7 137 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 CST3P01034 146 aaPredicted RBP15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 CXCL8P10145 99 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 VPS52Q8N1B4 723 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 FAM71DQ8N9W8 422 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 MMP19Q99542 508 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 FAM49AQ9H0Q0 323 aaPredicted RBP15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 POLIQ9UNA4 740 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 CHMP2BQ9UQN3 213 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 A0A0B4J269 797 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 PDGFRAP16234 1089 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 SNX16P57768 344 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 TGFB2P61812 414 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 TFDP2Q14188 446 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 MON1BQ7L1V2 547 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 SPATA18Q8TC71 538 aa15.73■□□□□ 0.11
UBE2D4-201ENST00000222402 SBF2Q86WG5 1849 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 CFAP73A6NFT4 308 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 A6NJR5 290 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 DNALI1O14645 258 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 MCL1Q07820 350 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 TTLL4Q14679 1199 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 ZDHHC14Q8IZN3 488 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 LRRC4CQ9HCJ2 640 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 PSMC3IPQ9P2W1 217 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 A0A1B0GUA9 196 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 MAP3K6O95382 1288 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 CPP00450 1065 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 VCPP55072 806 aaKnown RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 ROR1Q01973 937 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 MYO1EQ12965 1108 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 ZRSR2Q15696 482 aaKnown RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 KLHL38Q2WGJ6 581 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 ZPBP2Q6X784 338 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 FUKQ8N0W3 1084 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 PPM1NQ8N819 430 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 DDX1Q92499 740 aaKnown RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 SPATC1LQ9H0A9 340 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 SLX4Q8IY92 1834 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 MPZL3Q6UWV2 235 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 PHF13Q86YI8 300 aaPredicted RBP15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 CD101Q93033 1021 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 ERP27Q96DN0 273 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 SENP1Q9P0U3 644 aa15.72■□□□□ 0.11
UBE2D4-201ENST00000222402 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBE2D4-201ENST00000222402 LSM8O95777 96 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 411.2 ms